| New model in OGS2.0 | DPOGS200483 |
|---|---|
| Genomic Position | scaffold37:- 113164-126231 |
| See gene structure | |
| CDS Length | 2868 |
| Paired RNAseq reads | 24766 |
| Single RNAseq reads | 61624 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010419 (1e-10) |
| Best Drosophila hit | Saposin-related, isoform A (3e-154) |
| Best Human hit | proactivator polypeptide isoform a preproprotein (3e-32) |
| Best NR hit (blastp) | saposin-related [Bombyx mori] (0.0) |
| Best NR hit (blastx) | saposin-related [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005764 lysosome GO:0006665 sphingolipid metabolic process GO:0033227 dsRNA transport GO:0045169 fusome |
| InterPro families | IPR008373 Saposin IPR011001 Saposin-like IPR008139 Saposin B IPR003119 Saposin type A IPR008138 Saposin-like type B, 2 IPR007856 Saposin-like type B, 1 |
| Orthology group | MCL12647 |
Nucleotide sequence:
ATGACAAACACGTTTGCTGTTTGTCTCGTAGCCATATCATTCTTTTGTTGTACATGTTTG
TCTACAGCTAAACAAATACCCAGAGAATGTGCTAAGGGACCTACATATTGGTGTGAATCT
TTAAAGAATGCAGCCGATTGTGGTGCTGTGGGTCACTGTACTAGCACGGTTTGGGAGCTT
GAGGTCACAGATGTCAAGAATAACATTATCTCGGACAAGATTGTACAAAAGTTCAGTCAG
CTGAAAGATGTCAATACTATGATCAATGCGGACTATCTCTCGTCCTCAATCAGCTCGGCC
TGCCGCGACCTTCCTACTCCAGGTGTACAGCGTCTGTGCAAAGCTAACACAGCTGACCTG
GGACAGTATCTCTTGCATGTTCTGCTATCGAAAACAACACCACAGACTATTTGCAGGATA
GTCGGAATGTGTAACAATGACAAGCTAGAGAACCTCAATTTGAAAAAGAGGTCAAACGAA
CCGAGCAAAGAGAAACATTTATTGGGAGGCGCTCGTTGTACGTGGGGTCCTTCATATTGG
TGCAGTAATTTCAGTACTGGCAAGGAGTGTAAGGCAACTCACCACTGCGTACAAAAGGTT
TGGTCCAAACAGACATACCCCGAAGATAATGATAGTATATGCAAGATATGTAAAGATATG
GTGAAACAGGCCCGGGACCAGCTGGAGAGTAACCAGACACAGGAGGATTTGAAAGCAGTT
TTTGAAGGTGAATGTGATCTGATTCCGGTTAAGTTAATAAGGAAAGAATGTAAGGTGCTC
GCTGACGACTTCGTGCCCGAGCTGGTCGAGACGCTCTCCTCTCAGATGAACCCGGATGCT
GTGTGCTCTGTAGCCGGCCTTTGTAATAGTGAGAGAATAGATCACATGTTAGAAGACTAT
TCATCTGCCCTGAAGTTGAGAGAAGATTGCACCAATTGCAGGCGTAGTGTTGGTATAGCG
AGGAAAAGGTTCGACGCTACCAGCTACGAAGACTTCCTTATGGGATTACTGAAGGTCTGT
CAAGAGATGGGCTCGCTGTCAGATTCCTGTTCCATGCTGGTGTTTAAATATTACGAAAAT
ATAATAGAAGCTCTAAAGAAAGATTTCACAGCGGAGGACGTGTGTCACCTCAGTGGACAA
TGTGCCCACTTGTACCACACGCACGACCTGTACACCTTCCCTGATGATGAACAGCATCTC
AAAGCATCCGATGACATCCCGTGCGAGTTCTGCGAGCAAATTGTGAAACATCTCCGTGAC
ACGTTGGTCGCTAACACAACTAAGATTGAGTTCAAGAAGATACTTGTTGGTCTCTGCAAG
CACTCCGGCAGCTTCAAGGACGAATGTCTTCACCTAGTGGATCAATATTATGAAGTAGTC
TACACGTTCCTCACAGCCGAAATGCAGCCTCAATTAATCTGCGGTTTCCTCGGCGTTTGT
AAAAAGAAGACGGACATAACCATCGCTCCCTTACTGCCCAATGAGCTGGAGATTAAGACG
ATCGGAATATCTGACTCACTTATTGGAGCCGATGAAGCCAACAGCTATACACATAAGCCA
AAACAAGATAATGTAAAAATCTTAGACGCGGATAAAGCTCAGCTTCCTATAGAGAGGATG
TTTGTGTCTGTGCCCCAAACAGGAAATACTGAGATATGTACATTCTGTCAATACTTCCTA
CATTATATACAAGTTGAGCTCAGCGACGAAAACACTGAGGAGGCGATAAAGAAAGTGGTA
GAAGACGCATGCGATGTTTTGCCGAACGCCATAGACTCTACCTGTAGGCAGTTCGTGTCA
CAGTACGGAGCTGCCGTTATAGCGCTGCTGGTGCAAGAAATGGATCCCGCAGAGGTTTGT
CCAACCTTAGGCCTCTGCCCCAAGTCGAAGGTCAAAGTATCGGACAGTCCAAACTGTGCC
TTATGTCTGTTCGCGGTTCAACAAGTAGAAACCGTTCTGAAGGATAATAAAACAGAGGCT
AGCATCCGGAAAGCCTTAGACAGTCTCTGCAACAGCCTGTCGGCGAATATGCGCCCGGCG
TGCGTAAACTTCGTCGAGTCGCACACGGACCAGCTGATAGAGATGCTGATAGCCGATCTC
ACGGCTCAGGAGATATGCGTGTTCCTCAAAATGTGCAAGGACGAGCACACACGCACGGAC
CCGCTGAGGATCACAGATATAGACAGGTACCACCGCAAGCCGCATCTGAGAGGAGACTGG
AATGCACGGAAACGACCCATGCTGCCCAGGAACATGCTGGAACCCGGCGTAGGAGATATT
GAGACCAACGAGATCCCGGACCACACAGTGAACGGGCGACCCGTCCACAACCAGAACCCC
GTGTGTGTCATCTGCGAGTTCGTGCTCAAGGAGATCGACGACCAGATCAAGGACAAACAT
AACGTTGACGAAATAAAGAAGGTGGTGCACGGCGTGTGTAAGCGGATGCCGAAGTCTGTG
AGGAACGAGTGCGACCAGTTCGTGGAGAAGTACGCGGACCTCGTGATCAGTCTCCTGGTG
CAGGAGCTGGACCCCGACGAGGTGTGCCAGCAGCTCAAGCTGTGCAAACCCTCCGGCATC
GATCACTTTAAAGGTGAAGTTCTGAACTGCGCTGTCTGCGAGTCCATTGTCCAGGTGTTG
AAGAAGCTCGCCACCAACAAGAAGCTGGACGACGATATAATACATGTGACGGAACTGGCG
TGCAATGAGCTGCCGGCGAAATTTGCGAAAAGGTGTCGCAACATGATGGAGGTGTACGGT
GAGAGTATCATCGAGCTGATCAAGTCCTCTGGATCTAGATTTATCTGTGGCATGATTGGA
TTCTGTGGGGAACGGCCGGCCAGGCTACAGATGACGCCAGCTATATAG
Protein sequence:
MTNTFAVCLVAISFFCCTCLSTAKQIPRECAKGPTYWCESLKNAADCGAVGHCTSTVWEL
EVTDVKNNIISDKIVQKFSQLKDVNTMINADYLSSSISSACRDLPTPGVQRLCKANTADL
GQYLLHVLLSKTTPQTICRIVGMCNNDKLENLNLKKRSNEPSKEKHLLGGARCTWGPSYW
CSNFSTGKECKATHHCVQKVWSKQTYPEDNDSICKICKDMVKQARDQLESNQTQEDLKAV
FEGECDLIPVKLIRKECKVLADDFVPELVETLSSQMNPDAVCSVAGLCNSERIDHMLEDY
SSALKLREDCTNCRRSVGIARKRFDATSYEDFLMGLLKVCQEMGSLSDSCSMLVFKYYEN
IIEALKKDFTAEDVCHLSGQCAHLYHTHDLYTFPDDEQHLKASDDIPCEFCEQIVKHLRD
TLVANTTKIEFKKILVGLCKHSGSFKDECLHLVDQYYEVVYTFLTAEMQPQLICGFLGVC
KKKTDITIAPLLPNELEIKTIGISDSLIGADEANSYTHKPKQDNVKILDADKAQLPIERM
FVSVPQTGNTEICTFCQYFLHYIQVELSDENTEEAIKKVVEDACDVLPNAIDSTCRQFVS
QYGAAVIALLVQEMDPAEVCPTLGLCPKSKVKVSDSPNCALCLFAVQQVETVLKDNKTEA
SIRKALDSLCNSLSANMRPACVNFVESHTDQLIEMLIADLTAQEICVFLKMCKDEHTRTD
PLRITDIDRYHRKPHLRGDWNARKRPMLPRNMLEPGVGDIETNEIPDHTVNGRPVHNQNP
VCVICEFVLKEIDDQIKDKHNVDEIKKVVHGVCKRMPKSVRNECDQFVEKYADLVISLLV
QELDPDEVCQQLKLCKPSGIDHFKGEVLNCAVCESIVQVLKKLATNKKLDDDIIHVTELA
CNELPAKFAKRCRNMMEVYGESIIELIKSSGSRFICGMIGFCGERPARLQMTPAI