| New model in OGS2.0 | DPOGS200490 |
|---|---|
| Genomic Position | scaffold37:- 7363-8726 |
| See gene structure | |
| CDS Length | 996 |
| Paired RNAseq reads | 2776 |
| Single RNAseq reads | 9626 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010423 (2e-158) |
| Best Drosophila hit | CG5362 (6e-124) |
| Best Human hit | malate dehydrogenase, cytoplasmic isoform 2 (6e-110) |
| Best NR hit (blastp) | cytosolic malate dehydrogenase [Bombyx mori] (5e-170) |
| Best NR hit (blastx) | cytosolic malate dehydrogenase [Bombyx mori] (7e-159) |
| GeneOntology terms | GO:0030060 L-malate dehydrogenase activity GO:0005829 cytosol GO:0006096 glycolysis GO:0006108 malate metabolic process GO:0005488 binding GO:0055114 oxidation reduction GO:0005811 lipid particle |
| InterPro families | IPR010945 Malate dehydrogenase, type 2 IPR001557 L-lactate/malate dehydrogenase IPR016040 NAD(P)-binding domain IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal IPR001252 Malate dehydrogenase, active site IPR011274 Malate dehydrogenase, NAD-dependent, cytosolic IPR022383 Lactate/malate dehydrogenase, C-terminal IPR001236 Lactate/malate dehydrogenase, N-terminal |
| Orthology group | MCL15570 |
Nucleotide sequence:
ATGGCTGCACCAATCAAAGTTGTTGTAACAGGGGCTGCTGGTCAAATCGCGTACTCTCTT
CTATACCAAGTTGCTTCTGGAGCGGTTTTTGGTCCAGAACAACCTGTATTCCTGCACCTT
CTTGATATTGCTCCCATGATGGGAGTGCTGGAAGGTGTTGTTATGGAACTTGCTGACTGC
GCTCTACCTTTATTAGCTGGTGTTTTACCCACTGCCAATCCTGAAGAAGCATTTAAGGAT
GTAGCTGCTGCTTTTCTAGTTGGTGCTATGCCAAGAAGGGAAGGAATGGAAAGAAAAGAC
CTTCTTTCTGCTAATGTACGCATTTTCAAAGAACAAGGTCAAGCTTTGGATAAAGTTGCT
CGCAAGGATGTCAAAGTTCTTGTTGTTGGCAACCCTGCTAATACAAATGCTTTGATCTGT
TCTAAATATGCCCCATCTATTCCAAAAGAGAATTTCACTGCTATGACTCGTCTTGATCAG
AATCGTGCCCAGTCTCAATTAGCAGCTAAGCTTGGAGTACCAGTACAGGATGTTAAGAAT
GTTATTATCTGGGGTAACCATTCATCCACTCAATTCCCTGATGCCTCCAATGCGAAAGTC
AGAATTGGTGGTGTTGAAAAATCTGTGCCGGAAGCTATAAACAATGATGCTTTCTTAAAA
ACTGATTTTGTATCCACTGTACAAAAGCGCGGTGCAGCTGTTATAGCAGCTAGAAAGATG
TCATCAGCTTTGTCAGCGGCCAAGGCAGCTTCTGATCACATGAGAGATTGGTTCTTGGGA
ACTGGCGATCGTTGGGTCAGTATGGGAGTTGTGTCTGATGGTTCTTACGGTGTTCCCAAA
GACGTTGTTTATTCCTTCCCCGTCACTGTCTCTAATGGAAAATGGAAAATTGTTGAGGGT
CTTACAATCTCTGATTTTGCACGGGAAAAATTAGATATCACTGGAAAGGAACTAGTTGAA
GAGAAACAGGATGCTTTGGATGTGTGCAAAGATTAA
Protein sequence:
MAAPIKVVVTGAAGQIAYSLLYQVASGAVFGPEQPVFLHLLDIAPMMGVLEGVVMELADC
ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRREGMERKDLLSANVRIFKEQGQALDKVA
RKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAKLGVPVQDVKN
VIIWGNHSSTQFPDASNAKVRIGGVEKSVPEAINNDAFLKTDFVSTVQKRGAAVIAARKM
SSALSAAKAASDHMRDWFLGTGDRWVSMGVVSDGSYGVPKDVVYSFPVTVSNGKWKIVEG
LTISDFAREKLDITGKELVEEKQDALDVCKD