| New model in OGS2.0 | DPOGS200493 |
|---|---|
| Genomic Position | scaffold37:+ 9441-62788 |
| See gene structure | |
| CDS Length | 5934 |
| Paired RNAseq reads | 2715 |
| Single RNAseq reads | 6343 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010538 (2e-68) |
| Best Drosophila hit | bicoid stability factor (0.0) |
| Best Human hit | leucine-rich PPR motif-containing protein, mitochondrial precursor (2e-74) |
| Best NR hit (blastp) | PREDICTED: similar to bicoid stability factor CG10302-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | GA10231 [Drosophila pseudoobscura pseudoobscura] (0.0) |
| GeneOntology terms | GO:0003730 mRNA 3'-UTR binding GO:0005737 cytoplasm |
| InterPro families | IPR011990 Tetratricopeptide-like helical IPR002885 Pentatricopeptide repeat IPR006910 Rad21/Rec8-like protein, N-terminal |
| Orthology group | MCL15978 |
Nucleotide sequence:
ATGTCGTCGCTTTTACGATCAACCAAATTTGTAAGATATTTTACCGGAGCCGCAAGAACT
TTAATTTTAAACTCTGCAAAAACAGCTGAAAGCAATCTCTTACTTAATTCTAAAGCTTTA
AGTGCGGCTAATAATGTCCTGTTGAGAGATTATGCAACAAAAAAGAGTGAAAGTCTAGAA
CCGTTGCTCCAGAGATTGGATTCAGAAGTGAGAAGATATGGAAGGATCACAAAAAGGGAT
ATTGATGAAGTGTTTGATGAAATACGAGCTAAGCAAGATATAACAAGTTCACAGTCATTA
TTAGTTATCAGATGCTGCGGAGAACTCGTGCCAGAAGAGCTGCCTCAACAGAGGACCCTT
CTAGTTCAAAAGATATGGAATGTTCTAACAGAGAGAGGTATACCCATGGATGTATCACAT
TACAATGCATTACTACGTGTTTATATTGAAAATGAGCACCCATTTTCACCAGCTCAGTTT
CTAGATGAAATGGAGAAGAAAGGCCTACAACCAAATAGGGTAACATATCAGAGACTCATG
TGGCGCTATTGTCAAGAAGGTGATGTAGAAGGTGCTACGAAAGTTCTAGAAAAGATGAGA
GAATTGAACATGCCAGTATCGGAACCGGTTCTAAATGCTTTGGTCATGGGTCATGCATTC
CATGGTGACACTGATGGCGCTAAAGCGGTATTGGAAACCATGGCTGGAGCTGGTCTCCAA
CCTTCCAATAGAACCTATGCTCTATTGGCATGTGGTTATGCCAAACAGGGCGATATTGCC
AATGTGGAGAACATCATTAGTACTGCAAAGGATAAAGAAATGATGTTAGCTGATAAAGAC
TTGTTAGATATAATAGAACATCTAGCGCTCAGTGGTCATGAGGATAAAATTGAACAGATA
TTCCCACATATGCACAAAGGTCTGGGCTACAACCAGGAAGTTTGTAACCTTATCTTCAAG
TTACTGAACAGTGGTTTAGACAGCACAGCCAAAAAAGTTATGAAAACTATGCCAAAGACA
AGCAATACAGATGACACACTTTTTAAGGGAGCTTTCTACATAAAACATTTGTTAAAACTG
AACAGATCAATTGATTCCATAGTTGAAACTTGTAGAGATCTGCAGAATGAAGAACTAATA
CCTAATGCTTTATACATAGCTACTGAATCCTCACTGACGCAGGGTAAATGTGAGCTGGCT
CAGAGACTCTTTGCTGAGATGGAAAAAGATGGCGTTGAAATAAGACCGCATTACTATTGG
CCACTTTTGGTACAAAAGGGTAAAGAGAATGATGAAGAAGGACTCCTTCACATATTACGT
GAAATGGGCTCCAAAGGCATTGCAGTTTCCGGAGAGACCTTAAGAGATTACATTATACCA
TATCTTATGCAAAACGATATCCCCCAAAACGTTATAGTCAAACTCCAAATAGCGAATGTA
CCCGTCATTCATAGCGCAAGGCAGGTTATGATCGACTTGCTAGAATCAGGGAAACTAGAC
AAAGCCGCGGAAATTGCCTTGAGTTATCGTCTAAGAGGTCAATACTCGCTAATCACACGT
CCACTCATTAATTGTTTGATTAGAACCAAGGATGTGGAATCGTTTGTTAAACTCCTTCAC
GTTGCTAGCAGCCCTCAAACACAGGAAGACGTATCTAATGATGATAGACCGAGTGACGAC
AATAGTAATGTAAGTGAAGTCGGGCGCATTCTTAAAACAGCTGTCAAAAATACGGCCAGA
AATGATTTGGCAGAGGATATTCTAAGCCAAGCCTTGTCCAAAGGGCTGAGGATTGATACG
TCATCAGCTGAAGAGATCCAGAGATTTCTTGGTGATAGGATGACAACTAAGATATCTGAA
TTACTCTCAAAACTAACGTCTTCGAGTCTGGAATTAGCACCTTTGGAATTTTCCAAACGC
AATCAAGGACCGCGCAGTGCTGCTCAGCTGGAGCAGTTATTGGAACAATTGAAAGCCAAG
GAAGGGAAAAACGTCAATCGCTTACAAAAACAAGTTATCACAGAGTACATAAAAGAAAAT
AACGTCGAAAAAGTTTCTAGTATAGTTGAAGATTTGAAAAAATCACCTGATTTCGAGATA
AATTTGTCGACTTTGGCAAGATTATTTGAATTTTACTGCGACAATGATATGATCGAAAAA
GCCATGGAAGTGAAATCTCAGATTGCGGCTAAGGACAAGGAATTTCAATTGAATAAATAT
AAATTGGTACTGATGGCGAACGCTTTGGTCAGGGCGAATAGAATCGATGAGGCTATCCAG
TTTCTGAATGATAATAAAGGTTCTGAAAATCCAGATACCGTATCATTCGTATTAAAATCT
AAAATCTGGCAGATGTTGAACAATTTGGCCGAGCAAAAGGACATAGAAAAAGTGAAGCTA
ATGACGAAAACTCTACTCGAAAACAATTACGTCGAACCCAGCAACGTTATTTTAGGGCCA
AGTATTAAAGTGCATTTGTTGAATGATGACCTCGAGGGTTCGCTCACAGAGTTTGAGCGT
TGTTGCAAACAATACAGAAGTACCCCGTGGAAGGGTGAACTGATGAAAACTCTTATATTG
AAAGAAGATGCGACCAAATTACAGTGGCTCGCTGATATAAGCACTCAGATTCATGGCGAA
GTTAATATCTTACATGATTTAGTGTTAGCGTTCGTTGAATGTGGTCGGCTCAGACAAGCG
AGACGTATACTTGAAACACCCGGCTTGCACACACGACAAAAAAGATTACAAGATGCCTGC
CAGAGATACGTTGAGGAAGGAAAATTCGAATACTTGGAAGGATTACTTGAAGCTACAAAG
GAATTGTCCCATATTGACCGATCGAACATTTTCTATCAGCTGTTAGTAACATATTGTAAA
GCGGATGAAACAGATAAGGCGTTGGGACTTTGGACTCTATTGCAAGAAGAAGGTGAAATT
CCCAGCGAGAAATTCCTTACACACCTTGGAAGTCATCTGATATCCAAAAACAGAGAAGTG
CCATTTGTCATGCCAGAGAACAAAATGCAAAATCAAAAACCAAAGGTCAATGTCCAAAAA
GAAAATGAAACTAAAAAGGATCAAGATGTCAAAGAAGCTTCACAGACAGCCAAACAAACA
ATAACGACTAAAATTGAACAATTAACAAAAGAAGAAAAACTATCATCAGCTACAGATCTC
GCTGTCAAATCCATGGAGGACGGTGTTTTCCCAAAATCAAACACACTCAAATTCCTGTTA
AGAAAACTGGCCGATGAGGGGGAAGTGGAAAGAATTAAGGCCTTAGGAAAATATTTAGGT
GAAACGAAACGCCGCAAAGTTACCTACGACGATAAACTCACATTAGGGATATTCAAGCAG
GGAGGCGGCTCAGCTCACATGGAGAGTGTCTTGAATGCTGTGAACTCTGCGGCAAACGAT
AATGAAATTGAAGCTGCCCTCAAATCCTTCCCGAGAAGCAACGCTTTGGCTAACTGCATC
ACAAATGAGGAAATTCTATCGAAATGCAATAATGTCGTCGAAATCGTTGCATCCAAAGGA
TATCCATTGCCTGCTAATCTATTGTGGATGGAATATCTATTGGCCGGTAAAGATAAAGAA
GCAGACGCTCTATGGAACAAATGTCTGCGGAACAGTGGCTCTATTGTGTTCAGAAGACTC
CTCCAAGAGGCACACGTCCGTAAAGATCCCCAGCTGATAATGAAAATGATAAAAAAATTG
GAATCCAATAACAATATTTCAGCGACTTCAGTGGGAAACGCTTATTCTAGATTGATAAAT
TTATACCTAACCGATAATAACATCAGCGAAGCTAAGAAGACTCTAGAAATGGCTTTGAAC
AATGGTTTACAATTGGATCACATAAATCAATCAATAGAGTCATTACGAAGAGGTGGAAGA
TTTTATTTGTGTTGGGTTGCAGACTCATGGCCATTGCGTTTTGCTACAATAACTCACCGT
CAGCTTTGGTCGCAGGACATACGACAAATATGCAATGACTTGCTTGAAGTTATGAAAAAT
GAGTCCGGTCGACCCACGAATAGATTTTCGCTACGACTCAGTTCGCAACTCTTGCGCGGT
CTTGTTCGACTTTATCAAAGGAAAGTTACCGTGTTTGTTGGAGATCTTTGCATGATAAAT
GCTCATGTAATGAAAACCACTCACAAAAAATCTATATATGAGACAAGTGAAAACGTCGTC
AAAAGACCTGAGTTGCCGCGTCTTATTTTCGAGCTTCAGCCCGACGAGGAAGCTTTGGAA
GAAAAAATTCAGAACAGCGGAAATATGGTGGCTCACGTAGAAGACATAACTTTAAAAGAG
CCAACGCTGCCTGAAAATAGAATTGTATTAGATGATGGTTTCGGCGAACTCAATCCTGAT
CAACCATTACAAATCTTTGGAGAAAGGAGTATCGAGATGATGTTGTTTCAAGACAATCCC
GCACAGCAGAGCGTCCTAGACTTGCCGCTCGACTTCTCCACCGACAAATCGCACGACAAA
TCCAGACTCGTCCAACACGAAGCACAGATGGAAAGACTGCCTGAACACGACGTGTCTGTG
TTTGGTAAATCTATGGCGGAAGCGATGTATATTGGAGACTTCGATAAAGAAATCCCTGAA
ATCCCCGACCTTCCGCATCCCGATCCTCACACAGATAAAACAAAACTTGGAATAGATAAC
GTCAAAGAAAAGGAAGTCATTAAACGAAGTAAGAAGTCAAGGCGTGAGACTGACGAAATA
GTTCCGGAGGAACTGAAAGAGGAGCCCAGGACGAAGAGACGTAAACTAAGAAACAAACTT
ATAATTGACAAGAAAATTAAACTCACGTCAGATTATTTACGTTCACGAATCGATAATATT
CACGTTGAACTACGTTGTGAGGATTCTAAGGATATTATCAATCTGTTACCAACGGCCCCC
GTATTGTTATCCAGACCGACGAGAGAAGTCGGACGGAGGCTCACAGAACGATACTTGAGA
AGAACAGAACGAACACAGGAAGCCGTCCTTCACAACGAACAACGCTTTCCGATGAGGACC
ACAACACATAATATAGACGAAGAGGCGCAGGATGTTGATAAATCCGCGGGAGACCAGTTA
CTGCGAGATGTGTCGAAGGAAATGGATGTTACACACACAAACGTACAGGAAGCACCGGGA
ATATTAATATACCAACCGACAGATGTCGCTGAGCTACCCACTCAAGAGATACAAGAAATA
TCGAGAGCAGAAAAACGAGTCAGTGATGAACAGAGAACGCCAAAGAAACGTCGAAGCGGA
TATATCGCTTATCGTGAAACTCGGCTAACGACCGCCTTACCGTCGGCTGAAGCAAACAAT
GAAAATGTACCCGGCTCAGTACAGAAAAGTCGGCTGACGGCGCTCTTGCATAGAGAAGGA
CTCGCTGATTCTGATGAACAAGGGAACGTGGAAATGAGAAAAACAAACAGTTATACATCA
GAGACACCACTCGGCAGCTTGGACAGGACGAAGGTGTCACTCGGAGAATCAGAGAAGACC
ACGGACTCCAAGAGATTTATACGAGAGGAATGGGGCACTCAAGGAACGATGCATAAGATT
TATAAATGTATAAAATCCGGCCTGAAACCAGTTAACGTTGACCTACTTATATCTTCCGGA
CCCTTGATATCGGGTCACAGACGGGTCATAGTCGCTAGATGCTTCAATTCTATACTCAAA
TTAAAACAACATGGTTTTATAAGAATTTATAAAGATGCTGAAACATATGAGATAAAAGAT
ATTACTCTGGGCAGTAAAATAAGCTCACGGCCTTGGGAAAACAACATCCCCAAAGACCAT
GCTATCAGCGCGTTAGCTAGGGGCCCCTTGAACCTACACCTGGGTCGCAAGTCCCAGGAA
CTATTGAAGCCCTCTCCCCCCAAAAACGCGATGGACCCGGCACCCGCACGGTGA
Protein sequence:
MSSLLRSTKFVRYFTGAARTLILNSAKTAESNLLLNSKALSAANNVLLRDYATKKSESLE
PLLQRLDSEVRRYGRITKRDIDEVFDEIRAKQDITSSQSLLVIRCCGELVPEELPQQRTL
LVQKIWNVLTERGIPMDVSHYNALLRVYIENEHPFSPAQFLDEMEKKGLQPNRVTYQRLM
WRYCQEGDVEGATKVLEKMRELNMPVSEPVLNALVMGHAFHGDTDGAKAVLETMAGAGLQ
PSNRTYALLACGYAKQGDIANVENIISTAKDKEMMLADKDLLDIIEHLALSGHEDKIEQI
FPHMHKGLGYNQEVCNLIFKLLNSGLDSTAKKVMKTMPKTSNTDDTLFKGAFYIKHLLKL
NRSIDSIVETCRDLQNEELIPNALYIATESSLTQGKCELAQRLFAEMEKDGVEIRPHYYW
PLLVQKGKENDEEGLLHILREMGSKGIAVSGETLRDYIIPYLMQNDIPQNVIVKLQIANV
PVIHSARQVMIDLLESGKLDKAAEIALSYRLRGQYSLITRPLINCLIRTKDVESFVKLLH
VASSPQTQEDVSNDDRPSDDNSNVSEVGRILKTAVKNTARNDLAEDILSQALSKGLRIDT
SSAEEIQRFLGDRMTTKISELLSKLTSSSLELAPLEFSKRNQGPRSAAQLEQLLEQLKAK
EGKNVNRLQKQVITEYIKENNVEKVSSIVEDLKKSPDFEINLSTLARLFEFYCDNDMIEK
AMEVKSQIAAKDKEFQLNKYKLVLMANALVRANRIDEAIQFLNDNKGSENPDTVSFVLKS
KIWQMLNNLAEQKDIEKVKLMTKTLLENNYVEPSNVILGPSIKVHLLNDDLEGSLTEFER
CCKQYRSTPWKGELMKTLILKEDATKLQWLADISTQIHGEVNILHDLVLAFVECGRLRQA
RRILETPGLHTRQKRLQDACQRYVEEGKFEYLEGLLEATKELSHIDRSNIFYQLLVTYCK
ADETDKALGLWTLLQEEGEIPSEKFLTHLGSHLISKNREVPFVMPENKMQNQKPKVNVQK
ENETKKDQDVKEASQTAKQTITTKIEQLTKEEKLSSATDLAVKSMEDGVFPKSNTLKFLL
RKLADEGEVERIKALGKYLGETKRRKVTYDDKLTLGIFKQGGGSAHMESVLNAVNSAAND
NEIEAALKSFPRSNALANCITNEEILSKCNNVVEIVASKGYPLPANLLWMEYLLAGKDKE
ADALWNKCLRNSGSIVFRRLLQEAHVRKDPQLIMKMIKKLESNNNISATSVGNAYSRLIN
LYLTDNNISEAKKTLEMALNNGLQLDHINQSIESLRRGGRFYLCWVADSWPLRFATITHR
QLWSQDIRQICNDLLEVMKNESGRPTNRFSLRLSSQLLRGLVRLYQRKVTVFVGDLCMIN
AHVMKTTHKKSIYETSENVVKRPELPRLIFELQPDEEALEEKIQNSGNMVAHVEDITLKE
PTLPENRIVLDDGFGELNPDQPLQIFGERSIEMMLFQDNPAQQSVLDLPLDFSTDKSHDK
SRLVQHEAQMERLPEHDVSVFGKSMAEAMYIGDFDKEIPEIPDLPHPDPHTDKTKLGIDN
VKEKEVIKRSKKSRRETDEIVPEELKEEPRTKRRKLRNKLIIDKKIKLTSDYLRSRIDNI
HVELRCEDSKDIINLLPTAPVLLSRPTREVGRRLTERYLRRTERTQEAVLHNEQRFPMRT
TTHNIDEEAQDVDKSAGDQLLRDVSKEMDVTHTNVQEAPGILIYQPTDVAELPTQEIQEI
SRAEKRVSDEQRTPKKRRSGYIAYRETRLTTALPSAEANNENVPGSVQKSRLTALLHREG
LADSDEQGNVEMRKTNSYTSETPLGSLDRTKVSLGESEKTTDSKRFIREEWGTQGTMHKI
YKCIKSGLKPVNVDLLISSGPLISGHRRVIVARCFNSILKLKQHGFIRIYKDAETYEIKD
ITLGSKISSRPWENNIPKDHAISALARGPLNLHLGRKSQELLKPSPPKNAMDPAPAR