New model in OGS2.0 | DPOGS200495  |
---|---|
Genomic Position | scaffold37:+ 73174-75910 |
See gene structure | |
CDS Length | 1266 |
Paired RNAseq reads   | 407 |
Single RNAseq reads   | 1531 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010539 (6e-36) |
Best Drosophila hit   | wwox (2e-107) |
Best Human hit | WW domain-containing oxidoreductase isoform 1 (2e-90) |
Best NR hit (blastp)   | WW domain-containing oxidoreductase [Culex quinquefasciatus] (3e-124) |
Best NR hit (blastx)   | PREDICTED: similar to WW domain-containing oxidoreductase [Tribolium castaneum] (4e-118) |
GeneOntology terms    | GO:0016614 oxidoreductase activity, acting on CH-OH group of donors GO:0055114 oxidation reduction GO:0005515 protein binding GO:0005737 cytoplasm GO:0008152 metabolic process GO:0016491 oxidoreductase activity GO:0010212 response to ionizing radiation GO:0010165 response to X-ray |
InterPro families    | IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain IPR001202 WW/Rsp5/WWP IPR002198 Short-chain dehydrogenase/reductase SDR |
Orthology group | MCL11441 |
Nucleotide sequence:
ATGCACAATTTAGATTCAGACAGTGAGGATGAACTACCTCCAGGTTGGGAGGAAAAGTCT
ACTGAGGATGGAAATGTATACTTTGTCAATTCGTGCAATAAGAAAACACAATGGACACAT
CCTCGAACCGGTTGTAAAAAAGTAATCCCAAAAGATTTGCCATTCGGTTGGAGTAAGACG
GTTGATGAAAGTGGTAAGACACTATATGTTAATCAGGAAACCGGTAACAAGACATATGTG
GACCCACGACTGGCCTTCTCGAAGGAAGAAAAAAAACATGTAAATGACTTTAGGCAGCGG
TTTGATGGTTCTACCACAGCATTTCAGGTTCTACATGGAGTAGATTTATCAGGCAAATAT
GCTGTTATAACAGGATGTAATGCCGGTATAGGCTATGAAACTGCAAAGTCCCTAGCTAGA
CACGGCTGTAATATTTTATTTGCAAATCGTAATTTAGAAGCCACTCAAAAAGCCATTGAA
GATATTGTAAAAGAAACAAATGTTTCCGAAGAAAATTTGAAGTCAATTCAATTGGATTTA
GGCTCATTGAAAAGCGTGAAGAAGTGTGCCTTAGCTGTTAAAACCGTTTTTTCTGATCAC
ATTGATATGCTCATATTAAATGCTGGCGTCTTTGGTTTGCCATATGAAGAGACAGAAGAC
CAGCTAGATCGTACATTCCAAGTGAATCATCTCTCACACATGTACTTTGCTATGTTGTTG
GAACCGTTGCTGAGAAAAGGCTCAAGGGTTATCTTTGTATCATCCGAGTCACATAGAACA
GCCAGCCTTAAAAATGTATTTGTAAAACAAAATTTAGCACATCCCAAAGAATCCTACAGC
GCTATGACAGCGTACGGAAATTCAAAACTTTATAATATTATAACTGCCAAGATGTTAAGT
GAAGAGTGGAAACAAAAGGGCATTGCTGTGAATTCTTTACATCCCGGCAACATGGTCTCA
ACGAATCTGCCAAAGAGTTGGTGGCTGTACCAAGTCTTATTTTTTATTGTTCGACCGTTT
ACCAAATCATTGCAACAAGCAGCGGCAACAACAGTATATGTAGCTACAGCCTCCGAATTG
GAAGGAGTCACAGGACTCTATTTCAACAACTGCTTCTATTGCGAAGAGTCGACTCTAGCC
AGAGATAGAGATATATCTCACGAGGTCTTCTCTATATCCCTGAAGATGATCCAAGAGAGA
ATGGGTACTGAATATATAGAAGGGTTTGTACAGAAATATTGTACAGTCAAGAAGAATAGT
GATTAA
Protein sequence:
MHNLDSDSEDELPPGWEEKSTEDGNVYFVNSCNKKTQWTHPRTGCKKVIPKDLPFGWSKT
VDESGKTLYVNQETGNKTYVDPRLAFSKEEKKHVNDFRQRFDGSTTAFQVLHGVDLSGKY
AVITGCNAGIGYETAKSLARHGCNILFANRNLEATQKAIEDIVKETNVSEENLKSIQLDL
GSLKSVKKCALAVKTVFSDHIDMLILNAGVFGLPYEETEDQLDRTFQVNHLSHMYFAMLL
EPLLRKGSRVIFVSSESHRTASLKNVFVKQNLAHPKESYSAMTAYGNSKLYNIITAKMLS
EEWKQKGIAVNSLHPGNMVSTNLPKSWWLYQVLFFIVRPFTKSLQQAAATTVYVATASEL
EGVTGLYFNNCFYCEESTLARDRDISHEVFSISLKMIQERMGTEYIEGFVQKYCTVKKNS
D