| New model in OGS2.0 | DPOGS200134 |
|---|---|
| Genomic Position | scaffold789:- 478-7256 |
| See gene structure | |
| CDS Length | 2373 |
| Paired RNAseq reads | 1265 |
| Single RNAseq reads | 4303 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002780 (0.0) |
| Best Drosophila hit | ND |
| Best Human hit | E3 ubiquitin-protein ligase TRIM37 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to tripartite motif protein 37 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to tripartite motif protein 37 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005622 intracellular GO:0005515 protein binding GO:0046872 metal ion binding GO:0008270 zinc ion binding |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR013322 TRAF-type IPR008974 TRAF-like IPR001841 Zinc finger, RING-type IPR000315 Zinc finger, B-box IPR002083 MATH IPR003649 B-box, C-terminal |
| Orthology group | MCL15838 |
Nucleotide sequence:
ATGGCTACAAGAGGTGATAAAGGAAATGGAAATGGCGAGGAACAAATCGTTGAGACGTTG
GCAGAGGTGTTCCGGTGCTTCATCTGTATGGAGAAGCTGGTGGACGCCCACCTCTGTCCG
CACTGTTCCAAGCTTTGTTGTTATGCTTGCGTGAGGCGATGGCTTACGGAACAAAGATCC
CAGTGTCCTCACTGCCGAGCAGCTTTGCATCTTCATGAGTTAGTCAATTGCCGCTGGGTA
GAGGAAGTAACACAGCAAATTGAAACCATGCAACAGAGTAATTCAGTGTGCCAAAGAGAA
AACTTTAGGGATAGATGCCCGACACATCAAGAGAAGCTAACTGTTTATTGCTGGACTTGT
CGCCGCTGTATCTGCCATCAGTGTGCTCTTTGGGGTGGTACACATACTGGCCATACATTC
AAACCTCTTGAAGAAGTGTATGAACAGCATGTGACGCAGATCCGAGATGAAGTCTCCCAG
CTACGACGTCGTCTATTGGAGCTTATCAGCCTAGTCCAGGATGTTGAAAGGAATGTCGAG
TCGGTGCGTTCAGCAAAGGATGAACGTGTCCGTGAAATAAGAAATGCGGTTGAGCTGATG
ATATCTCGCCTGGACTCGGCGTTGAAAGCCAAGCTGCTGACTCTCATGGGACAGAAGAAC
AGTCTCACACAGGAAACAGAACAGTTGGAGCATTTGCTGCAGGAGATTGAACATCAGCTA
CACTCTAGCACCAGATCCGAACTGATAGCGAAGAGCGGCGATCTATCGAAAATGATCCAT
CAGGTCCGCAAGAAACCGATGGCGAGCTTCGTGACCGCGCCAGTACCGGCCGATTTTCAT
AGGCAAGTACAGTTCTACAATGAAATCGTGCCGAGCTACGACAGCAGCACCTTCCCGCTG
AGCAACTTCACTCAGCTGCAGCACGCGGCGTCGCCCGTGTACTCCGCGCCGCTGCACGTG
AACGGTCTGTGCTGGCGGCTCAAGGTATACCCTGACGGTAATGGCGTCGTGCGCGGCAAC
TATCTGTCCGTGTTCCTCGAGCTCAGCGCGGGTCTGCCGGAGACATCCAAGTACGAATAT
CGTGTGGAGATGCTGCACCAGGTGTCCCGTGACCCGTCCAAGAACATTGTACGGGAATTC
GCTTCGGACTTCGAGGTTGGGGAGTGCTGGGGTTACAATCGCTTCTTCAGATTGGACCTT
TTGGCGAGCGAGGGGTATTTGAACCCTGACACCGATACGCTCATCTTGAGGTTCCAAGTC
CGCCCGCCGACCTTCTACCAACGCTGCCGCGACCAGCAGTGGTACATCAACCAATTGATA
ACCATACAGAACCAACACATACTACAGATTAATGATCTCAAAGAGCGTCTAACACTGGAG
ATGTCCCACAACACTTTGGTGCCGACCCGCGCGACCCCCAACCCGGTGACGTCACAGGCG
GACGACAACCCCACACAGAACAACCCGGTGGATGGCAACAGCCTGAGCGACTCGCTCGTC
TACAACCAGTGGAAGTTCAACAGTCCACCCAGTGTAATGAGCGGACAGAGGCTGACCAGC
CCAGGCACCAGCGTGTGTCGCAGCTCGCTGGGGGCGGGCGCCATATGCTACGGGGACTAC
GGCGGCGAACGTGCCAAGACCACGGCCCAGCACGCGCTCGACTCGCCGTACAACCTGCCT
TCAACATCGAGGTCGGCGAGCTCGGTGCAAGCCACGAGCGGCGGCGGGGCGGGCGCGTCC
GTGACGGGAGACAAGTTATCGCTGGTGTCACTGCACACACTGCTGAGCGCGGCCGGCGGC
GCTCCTCGGCCGCGGGCCAGGCAGAGGCACGACTTCCTCACCGCGGACTCGCCGCTCATC
GCGGTGGCGAGTACTCCGGTCAACGAGGTGAACTCGGCCAGTGGGAGCGGTGTGTGCGCG
TCGCTGTCGTCACCCGAGCTGAGCGGGGAGGGGGCGAAGGCCGAGGCGGCGCCCGCCAGC
CCCGAGCCGCAACCGAACGCCCCCTCGGAGTCCAGCAGCGATACCGGGCAGGACATCATG
TTCAGTGAGTTGGATGGGTTCGCAGACGATAACAACCAGAGTCATGTGGAGGAGAACTCC
AACGAGGAAAACGACGTGGACGAGGAGACCATGTCCGAGGGGTCGTCCGGTAGCGGGTGC
TCCTGGTGTGCGCTGGACGAGCGGCCTGGGTCCCCGGCGTCCCCTCCGTCTCCCCTGTCC
CCATCCCCCGCGGGGTCCCTCTGCTCGGAGGCTCCGGTCCGCCGCCGCCTGCGACGCGCG
GCGCCCTACCGCCGCTCCCGCCCGGCCTGTCCGCCAGCGGAGCCCTCGCCCTCCGCACAC
GTCGGATGCGTCGCCTTATATCGCATATCCTAG
Protein sequence:
MATRGDKGNGNGEEQIVETLAEVFRCFICMEKLVDAHLCPHCSKLCCYACVRRWLTEQRS
QCPHCRAALHLHELVNCRWVEEVTQQIETMQQSNSVCQRENFRDRCPTHQEKLTVYCWTC
RRCICHQCALWGGTHTGHTFKPLEEVYEQHVTQIRDEVSQLRRRLLELISLVQDVERNVE
SVRSAKDERVREIRNAVELMISRLDSALKAKLLTLMGQKNSLTQETEQLEHLLQEIEHQL
HSSTRSELIAKSGDLSKMIHQVRKKPMASFVTAPVPADFHRQVQFYNEIVPSYDSSTFPL
SNFTQLQHAASPVYSAPLHVNGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEY
RVEMLHQVSRDPSKNIVREFASDFEVGECWGYNRFFRLDLLASEGYLNPDTDTLILRFQV
RPPTFYQRCRDQQWYINQLITIQNQHILQINDLKERLTLEMSHNTLVPTRATPNPVTSQA
DDNPTQNNPVDGNSLSDSLVYNQWKFNSPPSVMSGQRLTSPGTSVCRSSLGAGAICYGDY
GGERAKTTAQHALDSPYNLPSTSRSASSVQATSGGGAGASVTGDKLSLVSLHTLLSAAGG
APRPRARQRHDFLTADSPLIAVASTPVNEVNSASGSGVCASLSSPELSGEGAKAEAAPAS
PEPQPNAPSESSSDTGQDIMFSELDGFADDNNQSHVEENSNEENDVDEETMSEGSSGSGC
SWCALDERPGSPASPPSPLSPSPAGSLCSEAPVRRRLRRAAPYRRSRPACPPAEPSPSAH
VGCVALYRIS