New model in OGS2.0 | DPOGS215131  |
---|---|
Genomic Position | scaffold4879:- 5319-9078 |
See gene structure | |
CDS Length | 744 |
Paired RNAseq reads   | 592 |
Single RNAseq reads   | 3173 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000418 (4e-40) |
Best Drosophila hit   | yellow-f2 (5e-42) |
Best Human hit | ND |
Best NR hit (blastp)   | yellow2 [Bombyx mori] (2e-78) |
Best NR hit (blastx)   | yellow2 [Bombyx mori] (8e-75) |
GeneOntology terms    | GO:0005576 extracellular region GO:0006583 melanin biosynthetic process from tyrosine GO:0042435 indole derivative biosynthetic process GO:0004167 dopachrome isomerase activity GO:0048066 developmental pigmentation |
InterPro families    | IPR011042 Six-bladed beta-propeller, TolB-like IPR003534 Major royal jelly-related |
Orthology group | ND |
Nucleotide sequence:
ATGACCTTTAATTATATATTTAAAAATAGATTTCCCATTGAAGGTCTCGCCTCTATAACG
ATAGACATCAACGGGGATTGTGAAGACGCGTTCGCGTACGTTCCCGACTTGACGACGTTC
GGTTTGATAGTTTTCTCGCTGAAAGACCGGGACAGCTGGAGATTGACACATAACTACTTC
CACTTCAATCCAATAGCTGGAAATTTGCAGTTCTTCCAATGGAGTGACGGTTTGTTTAGT
ATAACCCTGACGCCGCCGGCCCGCTGCCGCACAGCGTACTTCCACCCGCTGATCAGCACT
GAAGAGTTCTCTGTATCAACATGCCTGCTGAAGAATAAGACCGCCAGCTCTGATCGTTAC
TACTTCGACTCTTATAATTACGTTGGTGACAGAGGCCGGAGCAGTCAGTCCACGATGCAC
GGGTACCACGAGAAGACTGGCGTTATCTTCTTCGCTGACATCGGCAGGGATGCTGTATCT
TGCTGGAATAGCGGAAATGTCCTCAACCCAGCCAATGTGGCTGTCCTTGTGAGGGATGGG
AAGAGGATGAGCTATCCGTCTGATCTCCACATCACTGGTGATGAGGTCTGGGTTATGGCG
AACACGCTGCCACGATTCGGTTACTCAAGGCTGGACCCGAACGAGTACAACTTTTATGTT
TACAGACACCAGTCACAGACGGTGAAGGAAAACATCGTGAGGGAACCTGGTCAATCCCCA
ACCCGCCTAGAGCGAGCGTGGTGA
Protein sequence:
MTFNYIFKNRFPIEGLASITIDINGDCEDAFAYVPDLTTFGLIVFSLKDRDSWRLTHNYF
HFNPIAGNLQFFQWSDGLFSITLTPPARCRTAYFHPLISTEEFSVSTCLLKNKTASSDRY
YFDSYNYVGDRGRSSQSTMHGYHEKTGVIFFADIGRDAVSCWNSGNVLNPANVAVLVRDG
KRMSYPSDLHITGDEVWVMANTLPRFGYSRLDPNEYNFYVYRHQSQTVKENIVREPGQSP
TRLERAW