New model in OGS2.0 | DPOGS214045  |
---|---|
Genomic Position | scaffold800:- 25496-43974 |
See gene structure | |
CDS Length | 1125 |
Paired RNAseq reads   | 116 |
Single RNAseq reads   | 281 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010379 (4e-90) |
Best Drosophila hit   | CG4341, isoform B (4e-72) |
Best Human hit | transmembrane and TPR repeat-containing protein 2 (8e-49) |
Best NR hit (blastp)   | PREDICTED: similar to AT30101p [Tribolium castaneum] (1e-102) |
Best NR hit (blastx)   | PREDICTED: similar to CG31690-PB, isoform B [Apis mellifera] (9e-87) |
GeneOntology terms   | GO:0005488 binding |
InterPro families    | IPR001440 Tetratricopeptide TPR-1 IPR011717 Tetratricopeptide TPR-4 IPR019734 Tetratricopeptide repeat IPR013026 Tetratricopeptide repeat-containing IPR011990 Tetratricopeptide-like helical |
Orthology group | MCL10463 |
Nucleotide sequence:
ATGAGTAGTGCGACCATGCGCAGAAATCTAGATTGGCGTGACGAGGAAAGTCTATTCAGG
AGTGCCATACACATCAATCCACCAAAAGCATATGGAAACTTGGGCAGCGTATTGATCACA
CAAGGCAGGCTGGCAGAAGCTGAAGTTGCATTTGAGAAAGCACTTAATTACCGACCCAAC
ATGGCGGACGTTCATTATAATCTGGGAATTTTACATCAAAACCAAAGACGATACGGAGAA
GCTATCAAAAGTTTCGAGAGGGCAATTTACTTTCGGCCTTCCATGGCCCTGGCATACGTT
AATTTGGGGACATCACTTATGGCGGATGGGAGGTTGGCTGAGGCTGCGAGTGCATTGCGG
GCGGGTGCACGAGCTGATGGCCTGCGCGTTCGGGATCGACGTGAACATGATGCAGCCCGA
GTGTCCGCACTAGTACAGCTTGCCTCGCTACATTCACAACGAGGACACTGGCATAAAGCT
CTCTCAGCGTATAAGGATGCCTTGCAAATATTGCCTGACTCAAACGCCCCCATTGTAGGC
TGGACTCGACATAATGTATTATCGATGGCAAGTAAAGTGCATATGCAGTTACATCAATGG
ACTCAAGCTGAACACAGCATCCTCTCAGCGTTGTCGCTCGCCCCGAATCATGTCGCTACT
CACCTTGCTCTAGCGCAAATTGTTTCTAGAAATGTAAGCAGAAGTATGGAAGCCGAGGTC
TGGTATAAAAAAGCAGTAACACTTGCTCCGGATGATCCTACAGTTAGAGATCAGTTTGGT
ATGTTCCTGAGATCGCAGCGCCGTTTACTCGAATCTGCTGAGCAGTTGGTAAAAGCCGCT
CGGCTCTCTCCAACTAACAGTGCTCGTGCTACAACGGCGGCTCGTGCCTTAAGAGACGCA
AGGCGATGTCGATCAGCCGAAAGATGGTATGCGAGAGCAGTGGAATTGAACCCTGAGGAT
GCAGAGCATCATTCCAATCTCGGCGCAATCTTGCATTTGAATGGAAAATATGTGGCAGCT
GCCTCCTCATATCGCCGGGCGTTACAATTGCAACCTAATGATCAAATTACAATCACGAAC
CTAAAGAGAGTCAGAAAACTAATTACCAACCAAAAGAAAAAATAA
Protein sequence:
MSSATMRRNLDWRDEESLFRSAIHINPPKAYGNLGSVLITQGRLAEAEVAFEKALNYRPN
MADVHYNLGILHQNQRRYGEAIKSFERAIYFRPSMALAYVNLGTSLMADGRLAEAASALR
AGARADGLRVRDRREHDAARVSALVQLASLHSQRGHWHKALSAYKDALQILPDSNAPIVG
WTRHNVLSMASKVHMQLHQWTQAEHSILSALSLAPNHVATHLALAQIVSRNVSRSMEAEV
WYKKAVTLAPDDPTVRDQFGMFLRSQRRLLESAEQLVKAARLSPTNSARATTAARALRDA
RRCRSAERWYARAVELNPEDAEHHSNLGAILHLNGKYVAAASSYRRALQLQPNDQITITN
LKRVRKLITNQKKK