| New model in OGS2.0 | DPOGS202936 |
|---|---|
| Genomic Position | scaffold3645:+ 15044-24882 |
| See gene structure | |
| CDS Length | 648 |
| Paired RNAseq reads | 20 |
| Single RNAseq reads | 48 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001435 (3e-12) |
| Best Drosophila hit | papilin, isoform E (5e-17) |
| Best Human hit | papilin (8e-15) |
| Best NR hit (blastp) | GI20499 [Drosophila mojavensis] (1e-30) |
| Best NR hit (blastx) | GI20499 [Drosophila mojavensis] (6e-27) |
| GeneOntology terms | GO:0005604 basement membrane GO:0005578 proteinaceous extracellular matrix GO:0030198 extracellular matrix organization GO:0005201 extracellular matrix structural constituent GO:0008270 zinc ion binding GO:0004222 metalloendopeptidase activity GO:0004867 serine-type endopeptidase inhibitor activity |
| InterPro families | IPR000884 Thrombospondin, type 1 repeat IPR013273 Peptidase M12B, ADAM-TS |
| Orthology group | ND |
Nucleotide sequence:
ATGGACAGGAGGAGACATATTGATTGGAGGAAAGCTTTTTTTTGGATAGTACCACTGGTG
CAGATTGCAATGTTAACGTCAGCAACAAACGTTACTGATAGTAGTCAGAATGAAGACGTG
ACGTCATATGCTTGGAGTGCTTGGAGTTCTTGGAGCGCGTGTTCTCGGACCTGTGGAGGT
GGTGTTGCGATGCAGAAAAGACAGTGCTTGTCCAGATCAAGTAATCCATCTAATATCTCT
GAAACTGATTCCATGATTCGGGTGGCGAGACATGTCCAGGACTGTCTCGGTCCGTCTAGA
AGATATCACGAATGCAACACAAAGCCATGTCCAGGAGAAGATAAAGACATGCGAGCTGTT
CAGTGCTCCAGTTATGACAAGAGACCATTTCGAGGAAGATTCTACACTTGGATCCCATAC
ATCGATGGTGATTCACCCTGTATTTTAAACTGTCGCCCCACTGGACAACAATTCTATGCA
TCGCTCTCCCTAGTTCGGGACGGCACACCCTGTACGAAGCCGGGGTACAGAGCTATTTGT
GTACAGGGGACTTGTAAGAATATTGAGTTCGAAATAGGAACGTGTAAGGAGAATGCTAGA
TTCAGAACGTGTCAGAGGAAATTGTTGCAGTTTACGGACCGGAAATAG
Protein sequence:
MDRRRHIDWRKAFFWIVPLVQIAMLTSATNVTDSSQNEDVTSYAWSAWSSWSACSRTCGG
GVAMQKRQCLSRSSNPSNISETDSMIRVARHVQDCLGPSRRYHECNTKPCPGEDKDMRAV
QCSSYDKRPFRGRFYTWIPYIDGDSPCILNCRPTGQQFYASLSLVRDGTPCTKPGYRAIC
VQGTCKNIEFEIGTCKENARFRTCQRKLLQFTDRK