New model in OGS2.0 | DPOGS213797  |
---|---|
Genomic Position | scaffold461:- 103191-106689 |
See gene structure | |
CDS Length | 1902 |
Paired RNAseq reads   | 760 |
Single RNAseq reads   | 2045 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006782 (0.0) |
Best Drosophila hit   | CG11178, isoform B (1e-98) |
Best Human hit | late secretory pathway protein AVL9 homolog (6e-78) |
Best NR hit (blastp)   | PREDICTED: similar to CG11178-PB, isoform B [Apis mellifera] (1e-151) |
Best NR hit (blastx)   | PREDICTED: similar to rCG52383 [Tribolium castaneum] (4e-128) |
GeneOntology terms    | GO:0016020 membrane GO:0016021 integral to membrane |
InterPro families   | IPR018307 Late secretory pathway protein AVL9 |
Orthology group | MCL13588 |
Nucleotide sequence:
ATGTCGTATATCAATGAACCAGTCTTAAACATTATAGTGGTTGGTTTCCATCATAAAAAA
GGTTGCCAGGTCGAGCATTGTTACCCAGAGTTAATTCCTGGTCATCCATCTGAATTACCA
GCAGCTTGGCGATATCTTCCAGCTTTAGCTCTGCCAGATGGCTCGCATAACTACTTATCA
GACACAATATTCTTCAGCTTACCCGGATTGACTGAACCTGCTCACACTGTTTATGGTATA
TCATGTTTTCGACAAATACCCATAGAGCAAGTTGCTCAGAAAACGGAAGATATGACCAGA
AGTTCTGTCCAAAAGAGCGTATGTGTTATTTGCCGAGCTCCATTGTTTGGTCGTCTGTCT
GTAAAGGTGGAACTTGTGGTGAGGGCTTGGTTCCTCCAGGGTGACTTTTCCCAGACCAAG
CTCTTAGAAGATGCTTTTAAACATCTCAATAGTTGTCCTGTTCAAATTGATCAGACCCTT
GAAGGTTTATCAGTGCAGAAGTTAGTAGAAAACTGGAGACATAAAGCCTTATTGTTGTTT
AAACTGTTACTGTTACGTCAGAAGGTTCTTATTTATGGATCGCCGGCCGGTTCACTGTCA
ACTGCATTGTTGACTCTTGTCTCTCTTTTACCGCAATGTCTCGAGTATGGATTGACTAAA
TCTGCTAATGTTGTTTTGTCTAGACCACTTTCACCAATACCTACTGTGATACCAGAAGAA
AAAACTACAGAAGACAGCATTGATGATGCTTTAGATGTTGTAGAGGACGCATTAAATGGG
ACAAATCAGCCAGATGATGAATTGTCTCCAAAAGAAACTGGAAATTTGTTTGAGGAAAAG
GACAGAGTCAGCCGTCAAAGTTTTGATGAATCAATCCTATCTGATGTTGTCGACAGACAA
GAACTGTCTGCTGGAAGGGAAAAATGTCACAGTATAGGAGAAAAATATAAGGTACAAAAA
CCACTGTCCGAAGCACAGCAAAGCCCTACAATGGCTAGAGACATGAGTGTCGATGGTCTT
TACAATCTGACGGGACAATTAGATCAAACTGAATGTGGTTTTCCCTTGAGCTTGTTTGAG
GATGGCTACATATGTTTACCGTACTTGTCACTGCAATATTTAGATCTGCTGTCAGACACA
TCTGTGAAGGGTTTTGTTGTTGGAGCTTCGAATGTTCTTTTTAAACAGAAGAGGCAGCTA
TTTGACGTCTTGGTCGAGCTGAACGAAATGAGGATAGAAACAGCTGACATGAGTTTAAGA
CGTCAGCTGGTTCTCAATACTGAAGATCTTAGGTTTGCGGATCACGTGGTCCGCCACGCC
TCCTCCCAGGGCGACACGTGGATACGGGATCAATTTGCTAGTTATTTAATATACTTATTA
CGAACTTCTTTATTACCAGAAGGGAGTCGGGAGATGGAATCTTATAATGCTCAGTTCATG
ACAGCCTTCAAGGCGACACCAGCCTACGACAAGTGGTTGAAAGCCACAAACAATGCCAAC
ATAGAACCCTTCATGAACCTGACTCCTATGCATCCGTTTTCTGGACAACTATCTGTCGCT
GACATGAAGTTAAAATTGGCACATACTATGTCGACTACGGAGGGCGGTCGTAAGGTGACG
GCGGCCGTGGCGAGCACGGGGCGGGCTGTGGCGAGCACGTCGCGGGCCGTGGGCGGAGCG
CTGTCACATGCTCGCGGCGCGCTATCGGGCTGGTGGAGCGCGCTCACAGCGCCCACGACC
GCGCCCACCGACCCGGACGTGGTCGACTTGAGCGACGTGAGCGATGCTGTAGAAGCAGAT
GACGCGACGGGTCAACTGGAAGACGACAACCGCCGCCTCCCGGATCCTCCCGACAAGCGA
CTCGACCCCGCCATCGACGTCACCAACATAAGAGTCATTTAA
Protein sequence:
MSYINEPVLNIIVVGFHHKKGCQVEHCYPELIPGHPSELPAAWRYLPALALPDGSHNYLS
DTIFFSLPGLTEPAHTVYGISCFRQIPIEQVAQKTEDMTRSSVQKSVCVICRAPLFGRLS
VKVELVVRAWFLQGDFSQTKLLEDAFKHLNSCPVQIDQTLEGLSVQKLVENWRHKALLLF
KLLLLRQKVLIYGSPAGSLSTALLTLVSLLPQCLEYGLTKSANVVLSRPLSPIPTVIPEE
KTTEDSIDDALDVVEDALNGTNQPDDELSPKETGNLFEEKDRVSRQSFDESILSDVVDRQ
ELSAGREKCHSIGEKYKVQKPLSEAQQSPTMARDMSVDGLYNLTGQLDQTECGFPLSLFE
DGYICLPYLSLQYLDLLSDTSVKGFVVGASNVLFKQKRQLFDVLVELNEMRIETADMSLR
RQLVLNTEDLRFADHVVRHASSQGDTWIRDQFASYLIYLLRTSLLPEGSREMESYNAQFM
TAFKATPAYDKWLKATNNANIEPFMNLTPMHPFSGQLSVADMKLKLAHTMSTTEGGRKVT
AAVASTGRAVASTSRAVGGALSHARGALSGWWSALTAPTTAPTDPDVVDLSDVSDAVEAD
DATGQLEDDNRRLPDPPDKRLDPAIDVTNIRVI