| New model in OGS2.0 | DPOGS206219 |
|---|---|
| Genomic Position | scaffold2656:- 20186-25632 |
| See gene structure | |
| CDS Length | 1320 |
| Paired RNAseq reads | 2252 |
| Single RNAseq reads | 5953 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009695 (2e-118) |
| Best Drosophila hit | chitinase 2 (7e-83) |
| Best Human hit | acidic mammalian chitinase isoform c (4e-58) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP005634-PA [Tribolium castaneum] (1e-95) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP005634-PA [Tribolium castaneum] (8e-95) |
| GeneOntology terms | GO:0004568 chitinase activity GO:0006036 cuticle chitin catabolic process GO:0005575 cellular_component GO:0043169 cation binding |
| InterPro families | IPR017853 Glycoside hydrolase, superfamily IPR001223 Glycoside hydrolase, family 18, catalytic domain IPR011583 Chitinase II IPR013781 Glycoside hydrolase, subgroup, catalytic core |
| Orthology group | ND |
Nucleotide sequence:
ATGTCACTGTCATGGAAGGGAGTGCTTTTCTTCATAGCATCATGTTCAGCTATCGCCGCG
GGACAGGGTGAGAGCGGCCCAAAGCACGGAAAGAATATCGTATGTTTTCTGGCCTCCTGG
TCTCATTATAGGCTGGACCCGATCAAGTTCCACTTATCCGACTTGGACCCATCGTTATGT
ACTCACCTAGTTTACTCGTTCGCTGTTCTCGATGAGAAAACAAATGAAATTAAAAGTTCA
GACGTAGGTCTGGATGTAGAGAATAAAGATACGACAGTTGGTTACAAAGGGTTTGTTGAT
CTCAAGAAAAAGAATCCTCATCTCAAAGTGACCTTGTGTATCGGAGGCTGGAATGAGGGG
TCCCAAAAATTTTCCCTAATGGCTAAAAGTCCACATTCAAGAAAACAGTTTATACAGAGT
GTTATCAAGTTTTTACAAACGTATAATTTCGATGGTCTCGACATTATGTGGAAGTATCCG
ACGACGAGGGGCGGCGACAAACAGGACAAAGATAACTTCGTTATTTTAGTTAAGGAACTA
AAGGAGGCTTTCAGTCCACACGACTTTATTTTAACAGCATCTTTGTCTGGGATTAAACAT
GTGATGGAACCAGCATACGACTTGGTCCAGTTGAACAAATACTTAGACATGATCCATGTT
TTGGGCTACGACTACCATGGTCCGTGGAATGGCATACTTGGGGCAAATTCACCGCTGTCT
TCCACCTCTCAAGATAACTTCCGTAGTGTGGAATACACTATAAGATACATGATAGCTTTT
GGCGTGAGTCCTGAGAAAATAAACCTAGAGTTGTCCCTGTTTGGAAGAACTCTCCTCTTA
AGCAACCCAAAAGAGGAACGAGTGAAATTCGGTCAAACGAAAGTTCAGGGCGTCGGATTC
CCTGGACCAATAATAAAAGGAATACATTACTACGCATACAATGAGATCTGTATGGAACTG
ACCAACAAATCCATACCCTGGGATTATCATTGGGATGAAGAGTCTTCCACACCATATCTC
CGGGATAAAGATCGTATCATATCGTACGACAACCCTCGCTCCATAGCAAATAAAGTTAAA
CTAGCTATAGACTATAACCTGGGAGGCTTCATGGTGTGGAGCGTGGACACGGACGATTTC
AAAGGTCTTTGCGATCTTCGCAATGATACTTACGATGACTACGAGGCGAGGATTAACAGG
ATATCAGACGATCCCATGCTACAGGACGCCATAGACAAACTAGATCTGTCAGACTTGGTT
TTAAACGACGGTTATTACATTAAGATGGATAAGAAATTGAGCTTCATCAAACTAGACTAG
Protein sequence:
MSLSWKGVLFFIASCSAIAAGQGESGPKHGKNIVCFLASWSHYRLDPIKFHLSDLDPSLC
THLVYSFAVLDEKTNEIKSSDVGLDVENKDTTVGYKGFVDLKKKNPHLKVTLCIGGWNEG
SQKFSLMAKSPHSRKQFIQSVIKFLQTYNFDGLDIMWKYPTTRGGDKQDKDNFVILVKEL
KEAFSPHDFILTASLSGIKHVMEPAYDLVQLNKYLDMIHVLGYDYHGPWNGILGANSPLS
STSQDNFRSVEYTIRYMIAFGVSPEKINLELSLFGRTLLLSNPKEERVKFGQTKVQGVGF
PGPIIKGIHYYAYNEICMELTNKSIPWDYHWDEESSTPYLRDKDRIISYDNPRSIANKVK
LAIDYNLGGFMVWSVDTDDFKGLCDLRNDTYDDYEARINRISDDPMLQDAIDKLDLSDLV
LNDGYYIKMDKKLSFIKLD