| New model in OGS2.0 | DPOGS209925 |
|---|---|
| Genomic Position | scaffold1866:- 37277-41353 |
| See gene structure | |
| CDS Length | 1215 |
| Paired RNAseq reads | 1024 |
| Single RNAseq reads | 2497 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010929 (1e-101) |
| Best Drosophila hit | clockwork orange (2e-29) |
| Best Human hit | hairy/enhancer-of-split related with YRPW motif protein 2 (2e-10) |
| Best NR hit (blastp) | PREDICTED: similar to class b basic helix-loop-helix protein (bhlhb) (differentially expressed in chondrocytes) (mdec) (sharp) [Tribolium castaneum] (1e-46) |
| Best NR hit (blastx) | PREDICTED: similar to class b basic helix-loop-helix protein (bhlhb) (differentially expressed in chondrocytes) (mdec) (sharp) [Tribolium castaneum] (1e-35) |
| GeneOntology terms | GO:0003702 RNA polymerase II transcription factor activity GO:0005634 nucleus GO:0045449 regulation of transcription GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0016564 transcription repressor activity GO:0042752 regulation of circadian rhythm |
| InterPro families | IPR011598 Helix-loop-helix DNA-binding IPR001092 Helix-loop-helix DNA-binding domain |
| Orthology group | MCL17144 |
Nucleotide sequence:
ATGAAGCCACGCACGGTAACCTACTCCAATGAGGAGTTCGCGCGCGAGCCGCTGAGCTTC
GCGCCGCCGTCCGAGGACGAGGCGGAGTACCCTCCAGGGTACAAGAAGGGGAAGGTCTCG
AGGCAAGATCCAATGTCGCACCGCATCATCGAGAAGCGGCGGCGGGACCGGATGAACAAC
TGCCTGGCGGACCTGTCCCGCCTCATACCACCCGAGTACCTCAAGAAGGGCCGCGGCCGC
GTGGAGAAGACGGAGATCATAGAGATGGCCATACGACACCTCAAGTATTTACAGGACAGA
GTCCACGTTCTGGAGCGGGGGTCGGAGTTCCTCGCGGGGTACCAGAGGGCGGGGGCGGAG
GCGGTGCGGTTCGTGGAGCTCCAGGGCTCCCGTGACGGCCTGGCGGATCAGCTCGCTGCA
CACCTACACTCACACGCTGACATGATGGCCAAAGAAGCTGTACACGAAAAGCGTGTGTAT
CCGAACTCCTCGTCGGAGACGACCAGCTCGTCGAGCAGTTCCCAGGGCTTCGCCGTGAAG
GTGATCCAGCGGCCGGAGCCCCCGCCCGCGTTCCCGGAGCCCTACGAGCCTGACAGACAG
GAACATTTCGCGGACTGCGAGAGATTGTCGGTGCACCAACCAGCTGTAATGGAGCCGTTG
GAAGGCGAGCCTCTCCCGCTGGACGGACGAGTGAAGAAGGAAGTGACGCTGAGGAAGATT
AGGAAGCCAGAACACGAGGACTACTTGCACTCGTACAAGTTCAAGAACTCCATAGAGAGG
AGGTTCTCCAGGTCGCAGGACTCCGAGGGTGACGCTTGGAGCGCCGGGCCGACAGCGAAG
GCCTACAATCATAAACGTCGGAGGCCTACCAAGCCCGCGCCGCCCTCCACGTCCACTTCC
GCCTCGGGCTCCACCGAGGAAGCGCGCGACACAAGCCCACAAGACACGTGCAGCGACTCC
CCCCACCACCACTCGTTCGACAAGCCGCCGCCGCCCGCGCAGTACGTGCCCGTGTTCGCC
TTGAACGCGCTCGGCAAGTACTACGTGCCGCTGAGCGTGGAGTACGGCTGCGTGTCTCGT
CAGCTGGGCGCGGGCGTGACGTCACTGGAGGCGGCCGAGGCGCGCGCGCTTCACCCCGTC
ACCATACACGTGAACTTCCAACCCTGCATCGACTACCTCAAGCGGGAGCCCGACCCTCAC
TGGCGCCCGCTCTAA
Protein sequence:
MKPRTVTYSNEEFAREPLSFAPPSEDEAEYPPGYKKGKVSRQDPMSHRIIEKRRRDRMNN
CLADLSRLIPPEYLKKGRGRVEKTEIIEMAIRHLKYLQDRVHVLERGSEFLAGYQRAGAE
AVRFVELQGSRDGLADQLAAHLHSHADMMAKEAVHEKRVYPNSSSETTSSSSSSQGFAVK
VIQRPEPPPAFPEPYEPDRQEHFADCERLSVHQPAVMEPLEGEPLPLDGRVKKEVTLRKI
RKPEHEDYLHSYKFKNSIERRFSRSQDSEGDAWSAGPTAKAYNHKRRRPTKPAPPSTSTS
ASGSTEEARDTSPQDTCSDSPHHHSFDKPPPPAQYVPVFALNALGKYYVPLSVEYGCVSR
QLGAGVTSLEAAEARALHPVTIHVNFQPCIDYLKREPDPHWRPL