| New model in OGS2.0 | DPOGS209927 |
|---|---|
| Genomic Position | scaffold1866:- 18282-20099 |
| See gene structure | |
| CDS Length | 960 |
| Paired RNAseq reads | 801 |
| Single RNAseq reads | 2093 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010930 (4e-99) |
| Best Drosophila hit | CG1542 (2e-52) |
| Best Human hit | probable rRNA-processing protein EBP2 isoform 1 (5e-32) |
| Best NR hit (blastp) | rRNA processing protein Ebp2 [Bombyx mori] (9e-115) |
| Best NR hit (blastx) | rRNA processing protein Ebp2 [Bombyx mori] (2e-99) |
| GeneOntology terms | GO:0006364 rRNA processing GO:0005730 nucleolus GO:0003674 molecular_function |
| InterPro families | IPR008610 Eukaryotic rRNA processing |
| Orthology group | MCL14629 |
Nucleotide sequence:
ATGAGTGACTTTGTGTTAAATGATAGTGATACGGAAGTTGATTCGGACGAAGACTTACAA
GAGGCGTTTGCAAAAGGTTTACTAAAACCCGGATTAAATGAGGAAATAGAAAAGGTACAG
AAAAAGTATGTAAATAATGTCGCAGATTTAAAAGCAAAGTTGAAAGAGTTTGAACTAAAA
TTACCATGGGTTGAGACACTCGAGCTAGTGAACTCCGTAGCACCCATGGCACCTGATATC
GCGTTGCAGATGCAGCAAACAGCCCAAAGGAGGAAAAACATCAAAGAAAATACAAAAGGA
AATGTGCTTTATGATCCCTCCCAGGATCCCGTTTTGAATGAATTCAAAAGAGAGAACTTG
ATCCATCGTCAGGCCCAAGCTGCGGTGATTGAGGGAATCAAACGCCTTAAAGATCTTAAT
ATACCCACTAAACGGCCAGATGATTATTTCGCTGAAATGGCAAAATCTGACGAGCATATG
CAGAAAGTGCGTAAGAATTTGATGGCAAAACAAGCGGCGCAAGCACGGACGGAGAAAGTC
AGACAGTTGAGGGAACAGAAGAAGATAGCTCATAGAGTTCAGGTTGATGTGAAATTGAAA
CAAGCGGCGGATAAACGACAAATGTTGGAACAATTAAAACGAGTGAGGAAAGGAAAATCA
ACAGATTTGGACTTCCTAGACGACAATAAAGGCAAAAATAATAGTAAGGGGAATAATACA
ACAGTGAAAGTAAACAAGAAGAGGGCTATGAAAGACAAAAAGTTTGGTTTCGGAGGTAAG
AAGAAGGGATCCAAGTTAAACACAAGGGATTCGACCAACCAGATGGAAGGATTCAACAGC
TCGGCCAAAAAGAAACCGTTCAATTTTAAAACTAAGAACTTTAAGCCGAATAATAAAAAG
CCGAGCAATAAAAAGAATCAGCGACCGGGCAAGTCAAAGAGGAAGGGCTCGAGGAAGTGA
Protein sequence:
MSDFVLNDSDTEVDSDEDLQEAFAKGLLKPGLNEEIEKVQKKYVNNVADLKAKLKEFELK
LPWVETLELVNSVAPMAPDIALQMQQTAQRRKNIKENTKGNVLYDPSQDPVLNEFKRENL
IHRQAQAAVIEGIKRLKDLNIPTKRPDDYFAEMAKSDEHMQKVRKNLMAKQAAQARTEKV
RQLREQKKIAHRVQVDVKLKQAADKRQMLEQLKRVRKGKSTDLDFLDDNKGKNNSKGNNT
TVKVNKKRAMKDKKFGFGGKKKGSKLNTRDSTNQMEGFNSSAKKKPFNFKTKNFKPNNKK
PSNKKNQRPGKSKRKGSRK