DPGLEAN21856 in OGS1.0

New model in OGS2.0DPOGS209929 
Genomic Positionscaffold1866:+ 11926-17014
See gene structure
CDS Length1923
Paired RNAseq reads  2384
Single RNAseq reads  6036
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA010941 (5e-51)
Best Drosophila hit  Srp72 (1e-106)
Best Human hitsignal recognition particle 72 kDa protein (2e-83)
Best NR hit (blastp)  signal recognition particle 72 kDa protein [Culex quinquefasciatus] (7e-144)
Best NR hit (blastx)  PREDICTED: similar to signal recognition particle [Nasonia vitripennis] (2e-124)
GeneOntology terms


  
GO:0005786 signal recognition particle, endoplasmic reticulum targeting
GO:0006614 SRP-dependent cotranslational protein targeting to membrane
GO:0008312 7S RNA binding
GO:0033227 dsRNA transport
InterPro families

  
IPR013699 Signal recognition particle, SRP72 subunit, RNA-binding
IPR019734 Tetratricopeptide repeat
IPR011990 Tetratricopeptide-like helical
Orthology groupMCL13500

Nucleotide sequence:

ATGTCAGCCAACAAGGAAAATAACCTTGTTCAGGCTTATATAGAATTAAATAAGTTTTGC
CAAAATGGAGACTACGAAAGAGCATTGAAGGCTGCAGGGAAAGTCCTGCAAATATCTCCG
AACGAACAAAAAGCATTTCACTGTAAAGTTGTGTGCTTCATACATTTGCACAACTTTAAA
GAGGCTTTATCTGTCCTCTGCAACCCCAAGAATGCGGCGTTGGCAGCTGATCTGGTGTTC
GAGAAGGCTTACTCTCAATACCGACTGAACTGTCCAAAAGATGCCTTGGACACTGTGGAT
AGTGCGCCTGAGTTAACACCAGCATTAAAAGAACTTAGAGCTCAAATCTTATACCGACTG
GAACAATACCAGGAGTGCTTCAACCTTTACCGTGATATAGTCAAGAATACTGACGACGAC
TATGAAGATGAGAGGAAGGCCAACTTGTCAGCCGTGGTCGCAAATCTGGCTGCTATCAAT
CCATCGGCAGATCTTCCGACATTCGAAGAAAATACCTACGAACTATCATATAACTCGGGA
ACCACTTTAGTCATGCGCGGCAAGTACAATGAAGCGTTATCAGTGCTGAAGAAGGCCGAA
CAAGGGTGTTCGGAAAGCATTATTGATGACGGAGGTACAGAGGAAGAAGCTAAGGAAGAA
GCTGCTATTATATGGGTCCAGCAAGCATTCTGCCAACAACAAATGGGCAAGGAAAAGGAA
GCGGCGGCCTTATACCATAATGTTCTTAAAGATAAACCCAGCGACCAAGCCCTGGTCGCT
ATCGCCAGCAACAACCTAGTAGTAATCAATCGTGACACCAATGTATTTGATTCTCGCAAA
CGTATGAAGGCTGCAACTCAAGATGGCCTGGAGCACAAGCTTACCTCAAGACAACGTGCC
TCTATTGCCTACAACCAAGCACTACTTGCTATATATTCTAATCAGCCGGACTTCTGCAAG
CAATGCTGTGTGAAACTCAACCGTGAGTTCAGACAAGATCATCGGGCAACGCTCGTCGAA
GCTGCCTCACTTCACAAGGAAGGGAAAAGACAGCAGGCTATCACTCTGCTGTTGAAGAGT
GGGGGCGTACTCGTTCTGGCTGCAGTACAGATCATGTTGGCACAAGGTGATCGGAAAGGT
GTTGTCAAGTTGTTGGAAGATAGTGAATTTAAATACAAACCAGCCGTCATTGGTCTTCTA
TACACCCTGCTGGCCGCGGATAATGAATATGAGAAGGCTTCTCAGATGTTCACCGATGTC
TACGAACATTACAAGAACGATGATGAGGCGATGTCCGCACTGCGCGGTGTGTGGCGGGCG
GCTGCGGAAGTTCACACTCGAGCCGGGGACGCCGCCCGCGCGGCCCTCGCGCACGAGGCG
TTAGCGCGGGCAGCGCCGCAGGACAAGCGTAGTCTCGCACGACTCGTGAAGGCGCTCCGC
GGAGACCCCGCCAGGGCGAAGGCCCTCGCTGAAGCCCTACCACCTATATCAGAGCTTGAG
TGTAAAATAGACGTGGATGCTCTGGAGTCCTCTAAGTGGATGATGGGTGCCAAGGTCGTC
AAGAAAACTGTACAGAGCAAACAGGAACAATCGCCAGGCACTCCTGGTTCCGAGCTGGGG
CAGAAGACTAAACCGAAACGTAAACGTAAGACCAAGCTACCACCTAATGCTGACCTCTCT
AGACCCCCGGATCCGGAAAGATGGCTGCCCAAGTACGAGCGCACGGCGTACCGCAAGCGT
CGCGGCGTGAGGCGTGACGTCATCAAGGGCAGTCAAGGACTTACCACCGCTGCCGTTGAT
CAGTACGACATGAGCAAACAGACTCCTAGTACCGCCACCAAGTCACCTCGTGTGGAAGTG
AAGGCCACGGAGACCTGGACGAGGAAGCAACAGAAGAAGAAGGGCAAGGGGCGGAAATGG
TGA

Protein sequence:

MSANKENNLVQAYIELNKFCQNGDYERALKAAGKVLQISPNEQKAFHCKVVCFIHLHNFK
EALSVLCNPKNAALAADLVFEKAYSQYRLNCPKDALDTVDSAPELTPALKELRAQILYRL
EQYQECFNLYRDIVKNTDDDYEDERKANLSAVVANLAAINPSADLPTFEENTYELSYNSG
TTLVMRGKYNEALSVLKKAEQGCSESIIDDGGTEEEAKEEAAIIWVQQAFCQQQMGKEKE
AAALYHNVLKDKPSDQALVAIASNNLVVINRDTNVFDSRKRMKAATQDGLEHKLTSRQRA
SIAYNQALLAIYSNQPDFCKQCCVKLNREFRQDHRATLVEAASLHKEGKRQQAITLLLKS
GGVLVLAAVQIMLAQGDRKGVVKLLEDSEFKYKPAVIGLLYTLLAADNEYEKASQMFTDV
YEHYKNDDEAMSALRGVWRAAAEVHTRAGDAARAALAHEALARAAPQDKRSLARLVKALR
GDPARAKALAEALPPISELECKIDVDALESSKWMMGAKVVKKTVQSKQEQSPGTPGSELG
QKTKPKRKRKTKLPPNADLSRPPDPERWLPKYERTAYRKRRGVRRDVIKGSQGLTTAAVD
QYDMSKQTPSTATKSPRVEVKATETWTRKQQKKKGKGRKW