New model in OGS2.0 | DPOGS209335  |
---|---|
Genomic Position | scaffold1536:+ 26101-26793 |
See gene structure | |
CDS Length | 438 |
Paired RNAseq reads   | 41 |
Single RNAseq reads   | 251 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004251 (1e-19) |
Best Drosophila hit   | ornithine decarboxylase 2 (2e-15) |
Best Human hit | ornithine decarboxylase (2e-13) |
Best NR hit (blastp)   | ornithine decarboxylase [Spodoptera litura] (7e-25) |
Best NR hit (blastx)   | ornithine decarboxylase [Bombyx mori] (3e-24) |
GeneOntology terms    | GO:0004586 ornithine decarboxylase activity GO:0005737 cytoplasm GO:0015940 pantothenate biosynthetic process GO:0009446 putrescine biosynthetic process GO:0019467 ornithine catabolic process, by decarboxylation GO:0005634 nucleus GO:0005829 cytosol |
InterPro families    | IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site IPR002433 Ornithine decarboxylase IPR000183 Ornithine/DAP/Arg decarboxylase |
Orthology group | ND |
Nucleotide sequence:
ATGGTTATTGAAAAGAGGGTTTCGAAGGCATTAGTATTGGAAAACAATACTGCCGAGGAT
GTCTCCCGAGCTATGATAGAAGGGGGACTTCAGAAGGATCCTTTTTATATATTTGATATG
GACAAGGCTTATCAACGCGTACAATACTTTAAAAATATGATGCCAAGGATAAAAATATTT
TATGCGGTCAAATCGAATGATAGTGACTTTATGTTAAAACTAGCAGCCTCACTTGGCCTT
GGCTTCGATTGTGCTTCACCGGGTGAAATACATAAAGTATTGAAACTCAGAGTATCGCCA
CTGAGTATCGTTTTTGCAATGCCAACAAAAAGTCCAGAGTGGATGTTATATGCAAGACAA
TGCGGGATTAAACACACCACTTTTGACAATTTGTGCGAACTAAATAAAATAAAACAATTC
TGGCCCGATGCAAAGTAA
Protein sequence:
MVIEKRVSKALVLENNTAEDVSRAMIEGGLQKDPFYIFDMDKAYQRVQYFKNMMPRIKIF
YAVKSNDSDFMLKLAASLGLGFDCASPGEIHKVLKLRVSPLSIVFAMPTKSPEWMLYARQ
CGIKHTTFDNLCELNKIKQFWPDAK