| New model in OGS2.0 | DPOGS208346 |
|---|---|
| Genomic Position | scaffold657:- 61930-65226 |
| See gene structure | |
| CDS Length | 1065 |
| Paired RNAseq reads | 485 |
| Single RNAseq reads | 1881 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009623 (2e-41) |
| Best Drosophila hit | syntaxin 17 (2e-17) |
| Best Human hit | syntaxin-17 (7e-06) |
| Best NR hit (blastp) | PREDICTED: similar to Syntaxin 17 CG7452-PA [Apis mellifera] (1e-34) |
| Best NR hit (blastx) | syntaxin 17 [Nasonia vitripennis] (1e-20) |
| GeneOntology terms | GO:0005484 SNAP receptor activity GO:0005886 plasma membrane GO:0016081 synaptic vesicle docking involved in exocytosis GO:0016192 vesicle-mediated transport GO:0007269 neurotransmitter secretion |
| InterPro families | ND |
| Orthology group | MCL15028 |
Nucleotide sequence:
ATGCAAGAAGGAAATAAATTACCACTGAAACGAGTGGAACTTTCATTGACAAAGTTCAAT
GAAGTGGCTATTCCACATCATTTAAACCTCCTTCGACAACACAAAGCAAATATCATCAAG
TATGAGGAGGCCTGCGATTACGCGCGCGTCAGGTCAGAGCAGACACACGCTCGACGTGTC
GCTAGTCAGCTGCGGACTCTTCTTGGAGAGCTGGACTCTCTTCGGAGACAGGTCAGGGCG
GAGGACGTCGCTGAGTTCGACGGACGCACACAGAGGTCACGGGACCTGACGCTCAGAGCC
ATCATGGACTATCTGGGTGTGATTGAACGGAGTTGTATAGCGTTAGTGAGAGGCCGACCA
GGTCGCGTGAACCGCGAGTCCTCGCCGATGTGTATGAGGCGGGGGGCGGAGGCTACGGCC
GCGCCTGGGGGCTCCACCGACTCGGTCGGAGTGCTCTCACACGCGGACACCACTGACACC
ACTGAACAGATACAACTACAGATCGACGAACAGGAGCTGTATCTCCGTGAGCGCGAGGCG
GTGCTCCGCGGTTGGGGCGACCTGCAGGCCGAGCTTCGCGCACTCCACGACGCCTGGCAG
ACCGTGCAGGCCGCCGCGCTCGCTCATAAGACACAGGTGCACGAGGTGTCCAAAGACGTC
CAGGAAGCCTCCGACAACGTGGAGTCGGCGCGCCGTCACCTCGCCGTCGCTGAGAGACTC
CGCTGCGGGACGTACGGCGTGCTGGGGGCGGTGGCGGGGGCGGCGGCCGGAGGACCCGTG
GGGCTCGCGTTGGGGCTCAAGGCGGGCGCAGCTGCAGCACTCGCCTCCTCGCTCGTGGGG
TACCTCGCCGGCAGAGTATTTGGAAGAAAGAGACAAGCTCAGCTAGAGGAGAGCACAGAT
GATACAAAAACAACAGGTGACGCAGAACATAGACAAGATGTCAGACAAGAGACAACACAA
CAGAAAGAAGATAAAAAGGTGTGTGGAGTGAACGTGACATTCAGATATATTATATACATA
CAATGTCTCAACATATACAGTGTATATGCTGAGAGTTTGCTGTGA
Protein sequence:
MQEGNKLPLKRVELSLTKFNEVAIPHHLNLLRQHKANIIKYEEACDYARVRSEQTHARRV
ASQLRTLLGELDSLRRQVRAEDVAEFDGRTQRSRDLTLRAIMDYLGVIERSCIALVRGRP
GRVNRESSPMCMRRGAEATAAPGGSTDSVGVLSHADTTDTTEQIQLQIDEQELYLREREA
VLRGWGDLQAELRALHDAWQTVQAAALAHKTQVHEVSKDVQEASDNVESARRHLAVAERL
RCGTYGVLGAVAGAAAGGPVGLALGLKAGAAAALASSLVGYLAGRVFGRKRQAQLEESTD
DTKTTGDAEHRQDVRQETTQQKEDKKVCGVNVTFRYIIYIQCLNIYSVYAESLL