New model in OGS2.0 | DPOGS209872  |
---|---|
Genomic Position | scaffold4110:+ 6880-10110 |
See gene structure | |
CDS Length | 1182 |
Paired RNAseq reads   | 222 |
Single RNAseq reads   | 587 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004426 (6e-39) |
Best Drosophila hit   | CG3285 (4e-09) |
Best Human hit | ND |
Best NR hit (blastp)   | sugar transporter, putative [Ricinus communis] (3e-12) |
Best NR hit (blastx)   | sugar transporter, putative [Ricinus communis] (8e-16) |
GeneOntology terms    | GO:0005351 sugar:hydrogen symporter activity GO:0006810 transport GO:0015144 carbohydrate transmembrane transporter activity GO:0016020 membrane GO:0016021 integral to membrane GO:0055085 transmembrane transport |
InterPro families    | IPR016196 Major facilitator superfamily, general substrate transporter IPR005828 General substrate transporter |
Orthology group | MCL39855 |
Nucleotide sequence:
ATGGTGTTTACGATTACTAGAGTAGTTGAAGATAACGAAGAAAATAAAGGCTCGACATTC
AAGCAGTACGCCTTAGCGTTCATTGTTAGCCTACTATTCTTCAATCATGGAGTGGAGAGC
CATAACCTTACAATATCAATTCATTCGGGACACTTTAAAACAAGTGATGAAGTTCCCTGG
ACGACTATAGCTTTGCTCCTTGGGGCTATCTTCAGCTTGTCTTTACATAGCTACCTTATA
GATATATGGGGCAGAAAGTTTGGTATATATGTCGTTATATTGTTACAGGGGGCGTCCTGT
ATACCATTTCTCATTACACCAAACGACATAGGAACGATAATAGTTCATGCTTTAACTGGA
GTGTCTACAGCCGCCATGTTTCTTTCTGTGCCAATTTACATCCGGGAAATCATTCCTACT
AGAAGCCGAGGGATAGCACTATCTTTAAGTGCGCTCATGACTTGCTGCGGTTACTTAGTA
AAGCTGGTGATGACTTCAGATAAGATGCTGTATCTGATAGCTGCCGTGGTGTTATTTGAA
TTTTGTGCGCTGATCATTGTTTTGGAATCACCAAGCTATTTGGTTAGAACTGGGAAAATT
GAGAAAGCTAAAATAAATATGGCAAAGTTGAAATGTCTGTCTCCTGAAGATTTACATGTT
ACAAACAAAATAAAAGTTCTTACAGAAGAGAGCGAACGTGCCAAACCAAATGGCAAATTT
TTAATTTCATGTCTTTACAGAAACAAAATATATTGGGACGAATTAAAAGTGGGTTTTATG
TTGAGTACAATAACAGTTATTGGTGGCAGCATTTTATTTCTGGACCAGGATAAAACCCTC
ATACAATTGAAAACTTCAGGGGAAACTGAAAAGGGCTTGGTGTTAGTATGCATGACCGTG
GGCGCCCTTGTTTGTGTAACCCTTATTGAAATAGTGCAAAGAAAATATCTTCTGACTCTC
GGATATTCCATCATGGTGCTGTCTATGGGTACGCTGGCAGTGTTCACCCAAGCCGATCTG
ACTGTGACGTCACTAAGATGGCTGCCTGTAGCAGCGCATTACGTCTTAATTTTCGGATAT
GGTCTCACATGGTGTTTACCAATAGTGATTATGGTGGAAATGCTTAATTTGGAGGTTATG
CTTATTTTTTGTTTCTTAAACCAATATCTAATACATATTTGA
Protein sequence:
MVFTITRVVEDNEENKGSTFKQYALAFIVSLLFFNHGVESHNLTISIHSGHFKTSDEVPW
TTIALLLGAIFSLSLHSYLIDIWGRKFGIYVVILLQGASCIPFLITPNDIGTIIVHALTG
VSTAAMFLSVPIYIREIIPTRSRGIALSLSALMTCCGYLVKLVMTSDKMLYLIAAVVLFE
FCALIIVLESPSYLVRTGKIEKAKINMAKLKCLSPEDLHVTNKIKVLTEESERAKPNGKF
LISCLYRNKIYWDELKVGFMLSTITVIGGSILFLDQDKTLIQLKTSGETEKGLVLVCMTV
GALVCVTLIEIVQRKYLLTLGYSIMVLSMGTLAVFTQADLTVTSLRWLPVAAHYVLIFGY
GLTWCLPIVIMVEMLNLEVMLIFCFLNQYLIHI