| New model in OGS2.0 | DPOGS203259 |
|---|---|
| Genomic Position | scaffold261:- 175183-175869 |
| See gene structure | |
| CDS Length | 687 |
| Paired RNAseq reads | 16 |
| Single RNAseq reads | 55 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002640 (3e-68) |
| Best Drosophila hit | ubiquitin carboxy-terminal hydrolase (1e-56) |
| Best Human hit | ubiquitin carboxyl-terminal hydrolase isozyme L3 (3e-47) |
| Best NR hit (blastp) | ubiquitin carboxy-terminal hydrolase [Drosophila melanogaster] (2e-59) |
| Best NR hit (blastx) | ubiquitin carboxy-terminal hydrolase [Drosophila melanogaster] (4e-57) |
| GeneOntology terms | GO:0016579 protein deubiquitination GO:0004221 ubiquitin thiolesterase activity GO:0006511 ubiquitin-dependent protein catabolic process GO:0005875 microtubule associated complex |
| InterPro families | IPR001578 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 |
| Orthology group | ND |
Nucleotide sequence:
ATGGCTGTTTCTTTGCCTATGGAAGCAAATCCTGAAACTATGAACAAATACCTTCAGAGG
CTTGGCGTTTCTAACAAATGGCGTATGGTTGATGTTATGGGTTTAGAAGGTGATCCTTTA
AAATGGGTGCCACGGCCAGTTCTCGCTGTTATACTTTTATTTCCGCTTTCTGAGCATTAT
GAAAGACATCGCTCTCAGCAGGAGAACGAGCTACAAATCAAACCTCAGCAACCTCCTAAG
GACGTGTTCCATTTAAAACAAGTGCTCAGTAATGTGTGTGGGACAATTGCTCTAGTGCAC
AGTGTCGCTAATAATATTAATACCATCGATTTAGAAGATGGTATTTTAAAAGATTACTTG
AAGTCCGCTTCAGGCTTGGACGCAGCAGCTAAAGGCGCTCTTTTGGAGAATTCAACACAT
ATTTTTAGGGCATATGAGGAAGTTTTAAACTCAGCGAATAATCCTGCAAATGAAGACAGC
GAACCTGTGAACAATCATTTTATAACATTTATCCATAAGAATGGTAATCTTTATGAGTTG
GATGGTCGTAAGTCAATACCTATTAACCACGGCCCAACGACTCCGGAAACTCTGTTGGAT
GACTCTGCCAAAATTTGCCTGGAATTCATAGCTCGCGAGCCAGATAATATAGGTTTTAAT
GTCGTTGCTCTCGTTCCTGCTCAATAA
Protein sequence:
MAVSLPMEANPETMNKYLQRLGVSNKWRMVDVMGLEGDPLKWVPRPVLAVILLFPLSEHY
ERHRSQQENELQIKPQQPPKDVFHLKQVLSNVCGTIALVHSVANNINTIDLEDGILKDYL
KSASGLDAAAKGALLENSTHIFRAYEEVLNSANNPANEDSEPVNNHFITFIHKNGNLYEL
DGRKSIPINHGPTTPETLLDDSAKICLEFIAREPDNIGFNVVALVPAQ