| New model in OGS2.0 | DPOGS203270 |
|---|---|
| Genomic Position | scaffold261:+ 87775-96995 |
| See gene structure | |
| CDS Length | 915 |
| Paired RNAseq reads | 75 |
| Single RNAseq reads | 313 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000449 (7e-66) |
| Best Drosophila hit | grain, isoform B (1e-27) |
| Best Human hit | trans-acting T-cell-specific transcription factor GATA-3 isoform 1 (2e-25) |
| Best NR hit (blastp) | grain [Tribolium castaneum] (2e-51) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC002315 [Tribolium castaneum] (7e-35) |
| GeneOntology terms | GO:0043565 sequence-specific DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0003677 DNA binding GO:0045449 regulation of transcription GO:0005634 nucleus GO:0046872 metal ion binding GO:0006350 transcription |
| InterPro families | IPR000679 Zinc finger, GATA-type IPR013088 Zinc finger, NHR/GATA-type |
| Orthology group | MCL19044 |
Nucleotide sequence:
ATGACTTTTGTAATTTTGGAAAAGCCCGGCCTTTTGTTCTCGGACGCAGCCAGCGAGACT
GGTCGAACGCTAAGCGGGAGTAGCAGTCAGGTCTGCAGGCCGCACTTCCACACGCCGTTG
CATCCGTGGCTTGATTCCAAAGCCCTCGGCAGCGGTGCTTGGGGCGGGGGCTTCCAACAG
GATGCGCCCGCCGATAAGCCCCTGTCCCCTGCACAGCATCCTCATCCTCATCCCCTCTTT
TCCTTCCCTCCCACACCCCCAAAAGACTCCACCCCAGATTCCGTGGCAGCTGCGGCGTTA
GGGCAACAAGATTATCAAGCAGCTGTAGCGCACGCCACGGCGATGAGCGTCGCGTTCATG
CAGCAGCAACAGGAGCTTCCTCTATGCGGAGACGTGAAGCCCATGATGGGCGCGCCGCCT
TCGAAGCAACGCGAAGGTGCGCAGCCGGACTCGTGTCCCCAGGAGAGTCAGCCCTCTGGG
GAATACAACGCTCAGTACAACGCCGCCGCCGGCGACTACTACAACTATCAAGGGAAGGGT
TATAGCGGGCAGCAACAGAGTAAGCCCCGGCCTAACAAGACTCGAACTAGCGCCGAGGGT
CGTGAGTGCGTCAACTGCGGTGCGACCAGTACTCCTCTGTGGAGAAGAGACGGGACTGGA
CACTACTTGTGCAACGCCTGTGGACTCTACTACAAGATGAACGGACAAAATCGACCCCTC
ATCAAGCCCAAGCGAAGACTGTGTCATTTTAACAACATAAAACGAAACCCGAAATGGGTG
TTGTTTACAGTTAGGGGCAGCAATAAAAAGGCGGGGCATGAATTCGAGCACGACAGCACA
TTAAGTGCTCCCACAAATTGGGCTCTTAAGAAACCTGAGCGTTTCGACGAAAGAGGACAC
ACCGTCCAGAACTAG
Protein sequence:
MTFVILEKPGLLFSDAASETGRTLSGSSSQVCRPHFHTPLHPWLDSKALGSGAWGGGFQQ
DAPADKPLSPAQHPHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFM
QQQQELPLCGDVKPMMGAPPSKQREGAQPDSCPQESQPSGEYNAQYNAAAGDYYNYQGKG
YSGQQQSKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPL
IKPKRRLCHFNNIKRNPKWVLFTVRGSNKKAGHEFEHDSTLSAPTNWALKKPERFDERGH
TVQN