New model in OGS2.0 | DPOGS203272  |
---|---|
Genomic Position | scaffold261:+ 211183-216677 |
See gene structure | |
CDS Length | 1161 |
Paired RNAseq reads   | 1834 |
Single RNAseq reads   | 6349 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000452 (4e-180) |
Best Drosophila hit   | innexin 3 (9e-127) |
Best Human hit | ND |
Best NR hit (blastp)   | innexin 3 [Bombyx mori] (0.0) |
Best NR hit (blastx)   | innexin 3 [Bombyx mori] (0.0) |
GeneOntology terms    | GO:0005921 gap junction GO:0016021 integral to membrane GO:0005243 gap junction channel activity GO:0005886 plasma membrane |
InterPro families   | IPR000990 Innexin |
Orthology group | MCL16951 |
Nucleotide sequence:
ATGGCTGTATTCGGCTTAGCATCAGCGGTCGCGGGCTTTGTAAAAGTCCGCTACCTGATC
GACAAGGCCGTTATTGACAACATGGTCTTTCGGATGCACTACAGGATCACATCTGCCATT
ATGTTCCTCGCCTGCATCCTTGTCACCGCTAATAATCTTATTGGTGACCCGATATCTTGT
ATAAGTGACGGCGCTGTACCAGCTCATGTCCTCAACACCTACTGCTGGATTACCTACACT
TTCACACTTCCATACAGCGGAGCTAAGGGAGTGGCCCACCCTGGTCTTGGAAACGACTAC
GAAGAAGAGAAACGCATTCATTCGTACTACCAATGGGTGCCGTTTATGCTTTTCTTCCAG
GGTCTTCTTTTCTACATTCCTCACTGGATCTGGAAGAACTGGGAAGAAGGCAAGGTCCGC
ATGATCTCTGATGGTATGCGCGGAACGACTGCTATCATCGCCGACGACAAAACAAACCGT
CAGAACCGTTTAGTTCAATACCTGTACGATACGCTTCACATGCACAACACATATTCATTC
GGATATTTCTTCTGTGAAGTCCTCAATTTCGTGAATGTCGTCGGCAACATATTCTTCTTG
GACGCATTCCTCGGCGGCGCTTTCTTATCTTACGGGACCGATGTCGTGAGGTTCTCAAAT
ATGAATCAGGAACAAAGAACTGACCCTATGATTGAGGTATTCCCGCGAATCACAAAATGT
ACATTCCACAAATACGGAGCCTCTGGAACTATTCAGAAGCATGACGCGTTGTGCGTTCTT
GCTTTAAACATCCTCAATGAAAAAATCTTCATATTCCTTTGGTTTTGGTTTATTATTCTG
TCCGTCGTATCCGGCCTGGCTATCGTGTATTCAGCAGCTGTCATCCTCCTGCCAAGTACA
CGTGAAACTATTCTCAAACGTCGCTTCAGATTCGGATCTCCAAATGGAGTAGAGGCCCTC
GTTAAGAGAACTCAGGTCGGAGATTTCCTTCTGCTACACCTACTTGGTCAGAACATTTCA
CTTCGTGTTTACGGCGAAGTGTTAGATGAACTATCGCGTCGTCTTATCCTGGGTTGTAAT
CCACCATCAGCACCCTCTACGTTGGAAATGGCACCGATCTATCCCGATATCGACAAATTC
GCCAAGGAAACTGAGACGTAA
Protein sequence:
MAVFGLASAVAGFVKVRYLIDKAVIDNMVFRMHYRITSAIMFLACILVTANNLIGDPISC
ISDGAVPAHVLNTYCWITYTFTLPYSGAKGVAHPGLGNDYEEEKRIHSYYQWVPFMLFFQ
GLLFYIPHWIWKNWEEGKVRMISDGMRGTTAIIADDKTNRQNRLVQYLYDTLHMHNTYSF
GYFFCEVLNFVNVVGNIFFLDAFLGGAFLSYGTDVVRFSNMNQEQRTDPMIEVFPRITKC
TFHKYGASGTIQKHDALCVLALNILNEKIFIFLWFWFIILSVVSGLAIVYSAAVILLPST
RETILKRRFRFGSPNGVEALVKRTQVGDFLLLHLLGQNISLRVYGEVLDELSRRLILGCN
PPSAPSTLEMAPIYPDIDKFAKETET