| New model in OGS2.0 | DPOGS208884 |
|---|---|
| Genomic Position | scaffold7344:- 5160-8152 |
| See gene structure | |
| CDS Length | 729 |
| Paired RNAseq reads | 19 |
| Single RNAseq reads | 74 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002556 (7e-26) |
| Best Drosophila hit | nicotinic acetylcholine receptor alpha 80B (8e-39) |
| Best Human hit | neuronal acetylcholine receptor subunit beta-2 precursor (1e-11) |
| Best NR hit (blastp) | nicotinic acetylcholine receptor subunit alpha 4 isoform 2 [Bombyx mori] (8e-85) |
| Best NR hit (blastx) | nicotinic acetylcholine receptor subunit alpha 4 isoform 2 [Bombyx mori] (2e-88) |
| GeneOntology terms | GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity GO:0045211 postsynaptic membrane GO:0006811 ion transport |
| InterPro families | IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006201 Neurotransmitter-gated ion-channel |
| Orthology group | MCL19919 |
Nucleotide sequence:
ATGATCTATTATAATGAGGACAGTAGACGGGCCCGTCTCGCTGCGGCCACGGATCGTTAT
GCAAACGACTCCAGCTTTGAATACAGCATCTTAAAATATTCAAGGGCCTACATTACCAAT
CTATTATCCCGTTTCACAACTTGCGGAGTGGTTGTTCGTTGTGGGGGCGCGGCCCGACCT
CTATATCCTTATCGTCTAGCTTCTGCTGATGACGACTGCTGTGCCCCTGGGGCTTGGCCA
CCTCCAGCTGTACCCGCCAGACCTCTCACTCGCACACCAAGCAAGGAGGACTTAACGCAT
ACCACATACGTGCAATCGGGGTTAAGTGAAAGTAACCGGTTTGGTGGCAGCTGCGTTGTC
CACGGTTCTAGCGAGGGCGGAGCACTACCAGTTCCCGAGGAGGAGGCTCTTAGTCCTGTA
CCGGAGCCCCCGCCTGGCTTCAGTCACTCCTCCTGTCCCCCTGAAGTACATAGAACGTGT
TTCTGCGTGAGATTCATAGCAGAACATACTAGGATGTTGGAAGACTCAACTAAGGTCAAA
GAAGATTGGAAATACGTTGCGATGGTGCTCGATCGTTTATTCTTATGGATATTTACCTTG
GCGGTTTTAGTTGGGACCGCCGGCATTATCCTTCAAGCGCCCACGTTATATGACGACAGA
GTGCCCATTGATAAACATTTCAATCAAATAGCAACGTCCTCGCTAGTCAGGTGTCCGCCA
CCGTCGTAA
Protein sequence:
MIYYNEDSRRARLAAATDRYANDSSFEYSILKYSRAYITNLLSRFTTCGVVVRCGGAARP
LYPYRLASADDDCCAPGAWPPPAVPARPLTRTPSKEDLTHTTYVQSGLSESNRFGGSCVV
HGSSEGGALPVPEEEALSPVPEPPPGFSHSSCPPEVHRTCFCVRFIAEHTRMLEDSTKVK
EDWKYVAMVLDRLFLWIFTLAVLVGTAGIILQAPTLYDDRVPIDKHFNQIATSSLVRCPP
PS