| New model in OGS2.0 | DPOGS211811 |
|---|---|
| Genomic Position | scaffold662:- 86966-92177 |
| See gene structure | |
| CDS Length | 2925 |
| Paired RNAseq reads | 1200 |
| Single RNAseq reads | 2901 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008150 (0.0) |
| Best Drosophila hit | golgi microtubule-associated protein, isoform A (6e-43) |
| Best Human hit | thyroid receptor-interacting protein 11 (3e-26) |
| Best NR hit (blastp) | PREDICTED: similar to slender lobes, putative [Tribolium castaneum] (9e-76) |
| Best NR hit (blastx) | PREDICTED: similar to SD07366p [Nasonia vitripennis] (6e-92) |
| GeneOntology terms | GO:0005801 cis-Golgi network |
| InterPro families | IPR000237 GRIP IPR010989 t-SNARE |
| Orthology group | MCL17487 |
Nucleotide sequence:
ATGTTACAAGAACTTAATGATTGTAAATCACAAACTCTAGTTGTACAAGAACTTGAAAAT
GAAGCCAATGTGACACAGAATGTAAAATTCCAAAAAACCATTTCTGAAAACGATGATTTG
AAAAAAAAGTTACACGCGGCTTCGTCGAAAAATGAGCAACTATTGATAGATATCCATATA
TTAGAAAATGACAAAGTTTTACTGACTAAACAGTTGGATGACCTGAAAGAGGCACTAGTT
AGTAAATCTAACATAGAAACAAGCACTCATAATGAAATGAGTGGCTTAGAGCAAAAAACT
ATAGAACTGCAAAGTAATTTACAAGAAACATTATCCAAAATTAATGAATTAGAAAAAGAA
AATAAAACATTAAAGGAGCAACAGAGCTCTTTTCCAACAGACGCTTGTACAACAGATATA
GATAAAGTAACCTTAGAAAATAATAGATTATTAGGAAAGCTGGAGGAAACTTTAAAAGAG
AATACAACTTTAAAGGGAGATATTGAACGATTAAAAAATGAGCTCAGCCACTTTAAATAT
TTAAATAAATGTTTAGTAGATGAAAACAATTTTCTAAAAGAGAAAGAAAAAGCTGCCGGC
GAAGAAATTTCAAAGCTTAAAGATTCGATAAATAATCTGAGCCGCAAAGAAGACGAGTTT
TATGAAGTAAATAAGGAATTATTATCACTCAAAGACAAAAATAAGCACTTGGAGCAAAAT
AAATTACAGCTTGAAATAGAATTAGCTTCCACGGATGGTAAAATAGTTCAGTTAGAAGAA
GAATTCGAAAAATTAATATCAGACCTAAATGACAAAGATTCCATTATTGATAATTTAAAT
ATTACAGTAAATAAAACCACTAATGAACTTTCAACGCTTCATAAAAATTTATCAGAAATA
GAAAGCAGCTTAGAAATTAAAAATAAAGAAATTGAACGCCTACAAAATTCTCTACAAGAT
GTCACTCAAAAAATGAATAACACGAATCTCAGTTCAAACCAAAGTATTGAAGAATTGAAA
AAGTTACAAATAGAAAAAGAAGAAATTAATAAACAGATGTTCAGTCTTCAAGACGATGTA
AATCAAAAAAATACAGAGATCACTTCATTAAGTAATACCCTTCAAGAATTTGAGAAGTCA
TGTGCAGACCGTAACCTCATGCTAGAAAAGAGAGATAAGGAAATAAAAGAATTAAATCAA
TCCATACTAGAATTATCTGATAAAATTAAGGCATCCGAAAACACAATTCAGCCAAATGAT
GAATATGCGAAACTGTTAGATGAAAAGAAAGCTGTAGATAAAATTGTAGATGAATTAAGA
TACAGCATTGAAGTGAAAGAAAAGAATTTATTAGATGAAAGACATAGATGTGATGAATTG
GAAAAAACTTGCGAAGAATTAAAAACGACCATAAATAATTCAATCGCTGAGAAAAATGAA
TTAATCAATCTCGTTAATTTAAAACACAACGAAAGTATTCAATACCATAATGAGATACAA
AGGCTAAATCACATACTCGTCGAACAGACGACTGAGTTTAAGAAGATTATAGAAGAGAAA
GATATTACTATAAGACATATAGCTGAAGGATGCACAAATTGTGAAGTATTGCGTACAACT
CTTAAAGAAAAAGATGAAATTATCCTCGCATTAAATCAGAACGTGAGTGATTATGAAAGG
ACGAAATCTGAACTTGTGAACGCTACTGAAACGGTCAAAAGTTTGACAAAACGTTGTGAA
GATTTTGACAAAAATATTACAATCGAGAAACAGAAGGTGAAGGATTTGACAGCAGAAAAC
GCACAGTTGTCTGAAAAAGAGCAGAATTCCTCGAAGGAATTAGAAAGATTACGTCATCAC
TTAATGGAAACCGAGGAGAGTTATACACAGGAATTGATGACGTCAGAGCAAAAATTGAAC
GAATGTCAGACAAGATTACATCAAGTGGAGGAAAGAGCAAAGCAGACGAGCACGGTCTAT
ACAAGTAATAGCATCCGAGCCAATCAAGAAGTAGAAACATTAAGAAATCAGATTAAACTG
TTAGAGAAGCAAAGAGAAGATGTTCAATTGAAATTGAGTGAAGCGGAAGATGCGAGGAAC
AGAAGCGAAGCCGCGCTAACAAACCTGCAGGTGGTGTTGGAACAGTTTCAGTTAGACAAA
GAAAGAGACATACATGCAGCGACAGAAAAAATCCGAAACAAAACGGAAGAATTTAGACGA
GCCAATGAAGAATTACGGAATGAAATCTCTAGACTACATAAGAAGTTGGAGGAATCCAGC
GCTGGTCTGAAAGCGGCGACTAGGCTCGGAGACCAGGTTGAAACCAAAACAGCTCAAATC
AATGACTTGAAGGAACAAGTTCGAGCTCTACAGAGTACGGTGGCGGCGGCGGAAGAGAGG
TACTACAACGCCATATCTAACCAACAGGACAAAGTTGATAAAAACCTGGTTAAGAACCTA
GTTATAAACTACGTGGTCAGTTCCCAGAATAATTTGAACAGAACCCAAACTCTCAGAATA
TTGTCGACGGTCCTAGACTTCAATCAGACGGAATGTGAAAAACTTGGTCTCATGAAGTCG
AACACTTCCAAGGACAGTCTGGCGGCGGAGTTCGTGAAGTTCTTACAAAACGAATCCAAA
CCTCGCGCCGCACTACCTGATATGATGGGTCTCGGCAGTGTTGCCAGCTCACGGAAGAGT
TCCACTGTTGGTCCGACCCCAGTGTTCGAGGCGGGTCACAAACGTAATCCATCTAACAAT
TCAAACAACTTGCTTTTCCATAATTTGGACAACATGGACACGGCGTCACAGGTATCGTTG
GAGTCAGACACGAGGGTCATACCGATAAACGCTCTCGACACCGGAGTCAATCAGATGAGA
AACAACGAAGGCGCCATCTTGAAACACGTTCTGAAGGATATGTAA
Protein sequence:
MLQELNDCKSQTLVVQELENEANVTQNVKFQKTISENDDLKKKLHAASSKNEQLLIDIHI
LENDKVLLTKQLDDLKEALVSKSNIETSTHNEMSGLEQKTIELQSNLQETLSKINELEKE
NKTLKEQQSSFPTDACTTDIDKVTLENNRLLGKLEETLKENTTLKGDIERLKNELSHFKY
LNKCLVDENNFLKEKEKAAGEEISKLKDSINNLSRKEDEFYEVNKELLSLKDKNKHLEQN
KLQLEIELASTDGKIVQLEEEFEKLISDLNDKDSIIDNLNITVNKTTNELSTLHKNLSEI
ESSLEIKNKEIERLQNSLQDVTQKMNNTNLSSNQSIEELKKLQIEKEEINKQMFSLQDDV
NQKNTEITSLSNTLQEFEKSCADRNLMLEKRDKEIKELNQSILELSDKIKASENTIQPND
EYAKLLDEKKAVDKIVDELRYSIEVKEKNLLDERHRCDELEKTCEELKTTINNSIAEKNE
LINLVNLKHNESIQYHNEIQRLNHILVEQTTEFKKIIEEKDITIRHIAEGCTNCEVLRTT
LKEKDEIILALNQNVSDYERTKSELVNATETVKSLTKRCEDFDKNITIEKQKVKDLTAEN
AQLSEKEQNSSKELERLRHHLMETEESYTQELMTSEQKLNECQTRLHQVEERAKQTSTVY
TSNSIRANQEVETLRNQIKLLEKQREDVQLKLSEAEDARNRSEAALTNLQVVLEQFQLDK
ERDIHAATEKIRNKTEEFRRANEELRNEISRLHKKLEESSAGLKAATRLGDQVETKTAQI
NDLKEQVRALQSTVAAAEERYYNAISNQQDKVDKNLVKNLVINYVVSSQNNLNRTQTLRI
LSTVLDFNQTECEKLGLMKSNTSKDSLAAEFVKFLQNESKPRAALPDMMGLGSVASSRKS
STVGPTPVFEAGHKRNPSNNSNNLLFHNLDNMDTASQVSLESDTRVIPINALDTGVNQMR
NNEGAILKHVLKDM