| New model in OGS2.0 | DPOGS201773 |
|---|---|
| Genomic Position | scaffold1298:+ 5510-7799 |
| See gene structure | |
| CDS Length | 807 |
| Paired RNAseq reads | 1036 |
| Single RNAseq reads | 4082 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008595 (1e-122) |
| Best Drosophila hit | Rpn12 (7e-61) |
| Best Human hit | 26S proteasome non-ATPase regulatory subunit 8 (3e-77) |
| Best NR hit (blastp) | PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 8 [Tribolium castaneum] (4e-86) |
| Best NR hit (blastx) | PREDICTED: similar to 26S proteasome non-ATPase regulatory subunit 8 [Tribolium castaneum] (1e-83) |
| GeneOntology terms | GO:0005634 nucleus GO:0005737 cytoplasm GO:0051436 negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle GO:0005515 protein binding GO:0006508 proteolysis GO:0005838 proteasome regulatory particle GO:0000502 proteasome complex GO:0031145 anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0005730 nucleolus GO:0051437 positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle |
| InterPro families | IPR019280 COP9 signalosome, subunit CSN8 IPR006746 26S proteasome non-ATPase regulatory subunit Rpn12 |
| Orthology group | MCL14768 |
Nucleotide sequence:
ATGGCTTCTGTAAAGGACGTTGCAACTCTTTATCAAAATCTTAAAACAGAATGGGCGAAA
AAACCACGCAAGTTAGACAAATGTGGCGAGCTTCTCAATAAAATAAAGATTGCACTAACC
CATCTTAGTTTCTTACCTAGTAATAATGAAGCCGCTAACCAAAAAGAATTGATATTAGGT
CGCGATGTTTTGGAAATCGGAGCACAATGGGCTGTAGCGACTAAAGACGTAAAGGCATTT
GAAAGATATATGTCTCAATTAAAATGTTACTACTTTGATTACAAAGATCACCTTCCGGAG
TCAGCCTTCACTTACCAACTGTTGGGTTTAAATCTTTTGTTTTTGCTGGCTCAGAATAGA
GTTGCTGAATTCCACACTGAACTCGAGCGTCTCCCTGTTGATGTGATCAGAGCGGATCCT
TATGTCAAGCATCCATTGGCTTTGGAACAGTATCTGATGGAAGGAAGCTATAATAAAATT
TTCTTGGCTAAGGATAATGTACCAGCAGAGAGTTACACATTGTTTATGGACACTTTACTA
GATACTGTGAGAGGTGAAATAGCAGCTTGTATTGAAAAGGCTTACTTGTGTATATCAAGC
ACTGAAGCTGCCAGAAGGCTTAACTTACCTAATCAGCAGGCAGTTTTGGAATATGGAAAG
AAGCGTAACTGGACATTGGGAGCTGATAACTGTTACCACTTCAATGCAGCTGAAGAAACT
TGTATATGTGCTGCCGGCGTCTTCCCATCAGCGGAACTGGCCGAACAGACTATAGAGTAT
GCCAGACATCTTGAAATGATAGTATAA
Protein sequence:
MASVKDVATLYQNLKTEWAKKPRKLDKCGELLNKIKIALTHLSFLPSNNEAANQKELILG
RDVLEIGAQWAVATKDVKAFERYMSQLKCYYFDYKDHLPESAFTYQLLGLNLLFLLAQNR
VAEFHTELERLPVDVIRADPYVKHPLALEQYLMEGSYNKIFLAKDNVPAESYTLFMDTLL
DTVRGEIAACIEKAYLCISSTEAARRLNLPNQQAVLEYGKKRNWTLGADNCYHFNAAEET
CICAAGVFPSAELAEQTIEYARHLEMIV