New model in OGS2.0 | DPOGS204846  |
---|---|
Genomic Position | scaffold443:- 45786-53221 |
See gene structure | |
CDS Length | 1461 |
Paired RNAseq reads   | 89 |
Single RNAseq reads   | 200 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011738 (4e-137) |
Best Drosophila hit   | CG12187 (2e-43) |
Best Human hit | protein piccolo isoform 2 (2e-10) |
Best NR hit (blastp)   | hypothetical protein AaeL_AAEL006926 [Aedes aegypti] (7e-110) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC010374 [Tribolium castaneum] (7e-47) |
GeneOntology terms    | GO:0005515 protein binding GO:0008270 zinc ion binding |
InterPro families    | IPR001841 Zinc finger, RING-type IPR001478 PDZ/DHR/GLGF IPR011011 Zinc finger, FYVE/PHD-type IPR013083 Zinc finger, RING/FYVE/PHD-type |
Orthology group | MCL12709 |
Nucleotide sequence:
ATGGTGGCGACCGAAGATACGACGGTACCGGGCCAGATAGAGACTCCTGGGACCTTCGGT
AAACTTCGACAGACATTATCTTCTTCACTGCTCACAGCTCAAGACAAAGTGACGAAGCTG
GGCCCACGGCCGGTTGTGACGGAGCCTGAACCAACGCCACCGCCTCCAGTGCAGCAACCG
CCTCCCCAGCCCACTAAGCCCGAACGCGAGGCGGGTAAGGCTCCATCCAGAGCGGGGGCT
TGCCGGGTATGTCTTAAAGCTTTAAAGCCCGGTGAGGTTTTCCACATATGCAATGGCTGC
CAGCATCGCGTCTGCGAAGACTGCTCTTCGTATTCCAAGCCCGCAAGTGACGAGGAGGCG
AATTCATGGCGATGCTCCGTATGCCGTCGTAAAGCTGCTCCCAGGGTTCCTCCGGCTGCA
CAAGATAGTACTGACTCACTTCTCGAGGTCCCCGTATTGGAGGCACTACAACGTCGACAC
TCTGAAGCAAGGCTCGGAAGTGGAGGTTCAAGTACCGGACTGGCTCCGCCACGATCACCC
GAACTGCGAAGACACTCCGATGTGTCACCTGCTTCCTTAAAGGAGCTGGAAAAATTAAAG
GGCAGCGGCAGCGTGACGCCAGGCGCAGACTCCCGCCGGCCAAGTGCAGCAACGCCCGCA
CGACGTCGCTCTGTCCGTGCTCCAGCGACGCCGCGCCAACGCTCAGTTGATGAAGACCAG
CACCCTACCGCACACCCAACAGCTCACACACCAGCACTCGCTGCTCCACCACCGATGTCT
AGACGGGCATCAGCAGTAGACGTGGTAGCAGGAGCTGGTTCGAGACGTAGTTCGTACAGG
GCAGAAGTGGACGCTCCCGATACACCGCAGATTACAGGGTTGAGCGTTGACGAAGACCGA
CCAATAAGACGAAGAGGCAGCCAACTGCCCGATATAGCTGCATTACAACAAAGGACAGGA
GCTCTGAGTGCTATGGCAGCACTTGCCTCACGCGGCTCAGAGGTATCCGACCCCAGTGCA
AGTGCTGCAATTGCTGCAGCACGTCAAATGTCAGTTGATGCTGAGGCGATAAAGATCGTC
ATACATGACGTTGATGATCGCTCGCCACGACGTGTGTCATTACGTCGCGATCCCAATGAT
AAAGGACATCGATCTCGAGGCTTCGGAATGCGCGTTGTTGGAGGAAAACCAGATGCCAGT
GGACGACGAGAAGCTGTTATAGTTTGGACAGTGCCTGGAGGCCCTGCAGACTTAGCTGGC
TTGCAACAGGGAGATAAGGCAATTAGGGTATTGGAATGGGGCGGTGTCCCATTGATAGAA
CGTAGCTTTGAGGAGGTATGCGCTGTGCTAGAACGTGGTGGCGACAGTGTTGAGCTGTTA
GTGGAACCTGCTCCCCAACTTGACGAGCCACCAGCACCACCCACAATGAGTCATCATCAC
CACGCACTTTATGGTACCTAA
Protein sequence:
MVATEDTTVPGQIETPGTFGKLRQTLSSSLLTAQDKVTKLGPRPVVTEPEPTPPPPVQQP
PPQPTKPEREAGKAPSRAGACRVCLKALKPGEVFHICNGCQHRVCEDCSSYSKPASDEEA
NSWRCSVCRRKAAPRVPPAAQDSTDSLLEVPVLEALQRRHSEARLGSGGSSTGLAPPRSP
ELRRHSDVSPASLKELEKLKGSGSVTPGADSRRPSAATPARRRSVRAPATPRQRSVDEDQ
HPTAHPTAHTPALAAPPPMSRRASAVDVVAGAGSRRSSYRAEVDAPDTPQITGLSVDEDR
PIRRRGSQLPDIAALQQRTGALSAMAALASRGSEVSDPSASAAIAAARQMSVDAEAIKIV
IHDVDDRSPRRVSLRRDPNDKGHRSRGFGMRVVGGKPDASGRREAVIVWTVPGGPADLAG
LQQGDKAIRVLEWGGVPLIERSFEEVCAVLERGGDSVELLVEPAPQLDEPPAPPTMSHHH
HALYGT