| New model in OGS2.0 | DPOGS204026 |
|---|---|
| Genomic Position | scaffold452:- 54637-58538 |
| See gene structure | |
| CDS Length | 513 |
| Paired RNAseq reads | 216 |
| Single RNAseq reads | 881 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004879 (3e-16) |
| Best Drosophila hit | lodestar (5e-40) |
| Best Human hit | transcription termination factor 2 (4e-31) |
| Best NR hit (blastp) | GE24955 [Drosophila yakuba] (6e-50) |
| Best NR hit (blastx) | GE24955 [Drosophila yakuba] (2e-38) |
| GeneOntology terms | GO:0006353 transcription termination GO:0008094 DNA-dependent ATPase activity GO:0003717 RNA polymerase II transcription termination factor activity GO:0006369 termination of RNA polymerase II transcription GO:0005634 nucleus GO:0004386 helicase activity GO:0003677 DNA binding GO:0005524 ATP binding |
| InterPro families | IPR001650 Helicase, C-terminal |
| Orthology group | ND |
Nucleotide sequence:
ATGACCGCGGGTAGACGAGAAGTAAGTGAGAAGGCGGTGGTGGTGTCTCAGTGGACGTCC
GTGCTGCGCCTGGTGGAGCGCGCCCTGACCGCGCTGGGCGTGAGCAGCGTCACGCTCAGC
GGCGCCGTGCCCGTCACCGCGCGGGCGGCGCTCGTTAACGCCGTTAATGATGCCAAATCA
GATGTCAAGGTGATGTTGTTGTCGCTGTGTGCGGGCGGTGTGGGTCTCAACCTGTGTGGG
GCAAACCACCTTCTCCTGCTGGACCCTCACTGGAACCCGCAGCTGGAGGAACAGGCCCAG
GACAGGATATACCGAGTGGGACAGACTAAACACGTGCATATATACAGGTTCATGTGCGTG
GGTACAGTGGAGCAAACGATCAGACAGCTGCAGGACGTCAAGCTAAAGATGGCGGACAGC
GTGCTCACCGGCGCCAGGAACACGAACGCCTCCAAACTCACCATAGAGGACCTCAAGATG
CTGTTCAACATGGGACCGCAGAGCGACTCATAG
Protein sequence:
MTAGRREVSEKAVVVSQWTSVLRLVERALTALGVSSVTLSGAVPVTARAALVNAVNDAKS
DVKVMLLSLCAGGVGLNLCGANHLLLLDPHWNPQLEEQAQDRIYRVGQTKHVHIYRFMCV
GTVEQTIRQLQDVKLKMADSVLTGARNTNASKLTIEDLKMLFNMGPQSDS