New model in OGS2.0 | DPOGS204030  |
---|---|
Genomic Position | scaffold452:- 23164-25170 |
See gene structure | |
CDS Length | 561 |
Paired RNAseq reads   | 466 |
Single RNAseq reads   | 2354 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004884 (5e-45) |
Best Drosophila hit   | CG10219 (5e-24) |
Best Human hit | ND |
Best NR hit (blastp)   | GH11519 [Drosophila grimshawi] (9e-30) |
Best NR hit (blastx)   | GH11519 [Drosophila grimshawi] (9e-25) |
GeneOntology terms    | GO:0008177 succinate dehydrogenase (ubiquinone) activity GO:0005749 mitochondrial respiratory chain complex II GO:0006099 tricarboxylic acid cycle GO:0020037 heme binding GO:0016021 integral to membrane GO:0005743 mitochondrial inner membrane GO:0000104 succinate dehydrogenase activity |
InterPro families   | IPR007992 Cytochrome b, succinate dehydrogenase small subunit, CybS |
Orthology group | MCL11456 |
Nucleotide sequence:
ATGGCCTTCTCGATGTTCCTTCGCACCCCTGCCTGTGCTGGCCGACTACTATCCCAACAA
GTGATGAGGCTGGGCACACAAGCTTCGCTAAAACCTGTTCAGACACAAAGAACGCTCGTT
GCTGTCAACACACTCAAGAATACTCTCTTGAAGTCTGAAACAACGCCTATATTGAATGCA
GTCCGGTCATTCCGTACATCAGCTGTGAAGATGGCAGCCGCCAAAAGCGATGACCACTCA
AAGCTGTGGGTGATAGAGAGGATAACATCGGCAATCCTTATCCCACTCGTCCCGTTAGCT
CTGCTTGTGCCCAACAAGCTGTTTGATTCCCTGCTGGCCATTATTGTTGTAGCCCACAGT
TTCTGGGGCTTAGAGGCGATCGCAGTGGACTATGTTAGAGCTTCTCTGTTCGGGCCTCTC
ATTCCTAAGCTAGCCATCGGCCTGGTTTATCTCATATCAATCGCGACCCTCGGAGGTCTT
TTCTACATCATCACCCACGACATAGGTATCGCCAACTCCATCAGACAATTCTGGTCGGTC
AAGTCTGGACAGAAAGCGTAA
Protein sequence:
MAFSMFLRTPACAGRLLSQQVMRLGTQASLKPVQTQRTLVAVNTLKNTLLKSETTPILNA
VRSFRTSAVKMAAAKSDDHSKLWVIERITSAILIPLVPLALLVPNKLFDSLLAIIVVAHS
FWGLEAIAVDYVRASLFGPLIPKLAIGLVYLISIATLGGLFYIITHDIGIANSIRQFWSV
KSGQKA