New model in OGS2.0 | DPOGS204033  |
---|---|
Genomic Position | scaffold452:+ 25640-28315 |
See gene structure | |
CDS Length | 1287 |
Paired RNAseq reads   | 2801 |
Single RNAseq reads   | 7294 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004782 (0.0) |
Best Drosophila hit   | Tat-binding protein-1 (0.0) |
Best Human hit | 26S protease regulatory subunit 6A (0.0) |
Best NR hit (blastp)   | 26S protease regulatory subunit 6A [Culex quinquefasciatus] (0.0) |
Best NR hit (blastx)   | 26S protease regulatory subunit 6A [Culex quinquefasciatus] (0.0) |
GeneOntology terms    | GO:0008540 proteasome regulatory particle, base subcomplex GO:0004175 endopeptidase activity GO:0016887 ATPase activity GO:0006508 proteolysis GO:0005838 proteasome regulatory particle GO:0030163 protein catabolic process GO:0005737 cytoplasm GO:0005524 ATP binding GO:0009987 cellular process |
InterPro families    | IPR003959 ATPase, AAA-type, core IPR005937 26S proteasome subunit P45 IPR003593 ATPase, AAA+ type, core IPR003960 ATPase, AAA-type, conserved site |
Orthology group | MCL12589 |
Nucleotide sequence:
ATGGCTACAACGCTGGAAGACAAGTCTATTTGGGAAGATGGTGAAGAAGCTCTCAGTGAG
GAAGTTTTGCGTATGCCAACAGATGAGATAATAAGCCGAACACGATTACTGGACAATGAA
ATTAAGATCATGAAAAGTGAAGTCATGAGAATTTCGCATGAATTACAAGCACAGAATGAC
AAAATCAAGGAAAACACAGAGAAAATTAAAGTAAATAAGACTCTGCCATATCTTGTTTCG
AATGTAATCGAATTACTCGACGTAGACCCTCAGGAGGAGGAAGAAGACGGCGCTGTGGTA
GACCTGGACTCGCAAAGGAAAGGGAAATGCGCTGTCATCAAAACTTCGACCAGACAAACA
TATTTCTTACCTGTAATTGGTCTCGTGGATGCTGAAAAACTGAAGCCCGGTGACCTGGTT
GGAGTCAACAAGGATTCTTATTTGATCTTGGAAACTCTACCAGCTGAGTATGACGCCAGA
GTTAAAGCTATGGAGGTGGACGAGAGACCTACGGAACAATACTCAGATATTGGTGGTTTG
GATAAACAAATACAGGAACTGATAGAGGCAGTTGTGCTTCCTATGACCCACAAGGAGAAG
TTTGTGAACCTCGGTATCCATCCTCCGAAGGGTGTGCTGTTGTATGGTCCTCCAGGAACT
GGCAAGACTTTGTTAGCTCGGGCTTGTGCTGCTCAAACTAAGTCCACATTCTTGAAGCTT
GCCGGCCCTCAGCTTGTACAAATGTTCATTGGCGATGGAGCTAAGCTTGTTAGAGATGCC
TTCGCATTAGCTAAGGAGAAGGCACCAGCGATAATTTTCATTGATGAGTTGGATGCTATC
GGTACCAAGAGATTTGACTCAGAGAAGGCAGGCGACCGTGAAGTGCAGAGAACTATGTTG
GAACTACTTAACCAGTTGGATGGTTTTAGCTCCACTGCAGATATAAAGGTTATTGCTGCC
ACAAACAGAGTAGATATTTTAGATCCAGCCCTGCTCCGATCTGGTCGTCTGGACAGGAAG
ATTGAATTCCCTCACCCCAACGAGGAGGCTAGGGCTAGGATCATGCAAATTCACTCTCGA
AAAATGAATGTGTCCCCGGATGTGAATTTTGAGGAGCTGTCGCGTTCTACTGATGATTTC
AATGGTGCCCAATGTAAAGCTGTGTGTGTTGAGGCTGGTATGATAGCGCTCAGACGGTCC
GCTACCGCCGTCACTCACGAGGACTTCATGGACGCCATCCTTGAAGTACAGGCCAAGAAA
AAGGCCAATCTCAGCTATTATGCTTAA
Protein sequence:
MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLLDNEIKIMKSEVMRISHELQAQND
KIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQT
YFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGL
DKQIQELIEAVVLPMTHKEKFVNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKL
AGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTML
ELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSR
KMNVSPDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSATAVTHEDFMDAILEVQAKK
KANLSYYA