| New model in OGS2.0 | DPOGS204034 |
|---|---|
| Genomic Position | scaffold452:+ 39412-47978 |
| See gene structure | |
| CDS Length | 2655 |
| Paired RNAseq reads | 762 |
| Single RNAseq reads | 1899 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004783 (0.0) |
| Best Drosophila hit | CG31108 (1e-147) |
| Best Human hit | tubulin polyglutamylase TTLL5 (2e-114) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC009196 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009196 [Tribolium castaneum] (3e-169) |
| GeneOntology terms | GO:0004835 tubulin-tyrosine ligase activity GO:0006464 protein modification process |
| InterPro families | IPR004344 Tubulin-tyrosine ligase |
| Orthology group | MCL11861 |
Nucleotide sequence:
ATGAGAAGACATGATGATGAAACCCACAACGGGAAAGAGAAAGAGAATGAAGGATCTATA
TCAGATTGGGTTTCCGGTGGACCGATCGGGTCCAAAGGAGCCGTGCTCGTGTTCCGATCC
TGCGTCCTCGCGACCAGGACGCCATCTGTTGAGTCGACAACAAAAACGGTTGGCAATAAC
ACCGGTACCACGATACTTTTGAACAAGGCCAAGAATATGGCTAGAAGGTTGGTAGCAGAG
CCGCACGCGTTCAGTGTCCGGCCCAAGAACATCATGCACGATGTGATGGAAACTTTCGGA
AATAGCAACAAATACACGGGACAAGCGTTCGTAGTGAGGCACGTGAGTGAAGCTGAGGTG
CCAGAGACCATGTCCGTAGATGATCAGGGCCACGAACGAACCGAACACAAGAGAGACATC
GATGACGTCCTCAATGATTTAAATAAAATTACGCTTAAGAAGAATCTCAATATAGAAAAT
ACAACGGCCAATATAAAACCTCCCGACGATCCCATGACTGTTAATAAGGATAAAGAAGAT
AAGAAAGGCAAGAAGAGCAAAGGCAAGAACAAACGCAAGAACACGCACAACCAAAGACCA
GTGTCACCGGCGTTGGACAGCGATGACTCGGAACACATGTTGGTTAAAGAAGTAGACAGT
GTTAAGGTGTTAGATAGTAATAATATGCCAGCAAGGATGCTCAAGATTACATACAGACTG
GTCAACACGGAGACCAAGCTGTTACATAGACTTTTACAAGCTCACGGTCTTCAGGAAGCG
TCCTCGGAAGCAAAGGATTTCAATCTGATGTGGGCGGGGCTGCATCCCAAGCCGGACGTG
TTGAGGTCGCTCACACCCTACCAACGCGTTAATCATTTTCCTAGGGTTAATTTGGTCAAG
AAGTTATTAGACGGACACGGTCTGTTAGAAGCTCACCCTGAATCAGCCACTTGGACCTTG
TTCTGGTCTACGAATCTTACTCCCTTTGAAGTGTTAAGATCCCTCACAACGATGCAAAAA
GTCAATCACTTACCCAGGTCCTACGAACTCACTCGGAAAGACAAACTGTTTAAGAACATA
GAAAAGATGCAGTACTTCCGTGGACTGAAACACTTTGACTTCATCCCCACCACCTTCCTG
ATGCCCAACGAGTACAAAGAGCTGTGCACGACACACTACAGGACCAAGGGGCCGTGGATA
GTCAAGCCGGCCGCGTCCAGCAGAGGGCGGGGCATTTATATCGTTAATACGCCCGAACAA
ATACCGAAGGGAGAAAATGTCGTCGTTGCCAAATATATAGACAAGCCGCTCCTCATCGGC
GGTCACAAGTGCGACCTCAGACTCTACGTGTGCGTCACCTCCATTGACCCCTTACTGATA
TATCTGTACGAAGAAGGCTTGGTGAGATTCGCGACCGTCAAATACGATAAGACGAACAAG
AACCTGTGGAACCCCTGCATGCATCTGTGTAACTACAGCATCAACAAGTACCACACGGAT
TACATCAAGTGCGACGACCCCAACGCCGGCAACATCGGTCACAAGTGGACGCTATCAGCT
TTACTGCGACATCTCAGGAAGCAGGGGCGGAACACGTCGGCGTTGATGGCGGCCATTGAA
GATCTGGTGGTGAAGTCTATCTTATCATCAGCACAGACCATCACCGCGGCTGCCAGAGTG
TTCGTTCCCAGCCTCTTTAACTGTTTCGAACTCTTCGGATACGACATCCTCGTAGACGAC
ATGCTGAAGCCCTGGCTGCTGGAGATAAATCTGTCACCGAGCCTGGCGTGTGAGAGTCCT
TTGGATGCGAGGGTGAAGTCCGCCCTTCTAGCGGACACCCTGACGCTGGTGGGTCTGCCG
GCTGTGCCCGGCAACAGACAGGAACAGCTGGGTCCTCAAGCGACCTCCCTGAAGATGAGG
ATCGGAGCTTGTCGCCGCGTTCACTCCGCTGAGAACGCATGCGTGAGGAACAAGAGTGGG
GGGCCGGGGGCGGGAGCGGGCTCGGGGGTGCCCGGCGCCGGGCCTCTGGGAAACCTCCTC
ACGGGCGAGGAGCTGAGGATAGTCCGAGCCGTGAGGGCGCAGTACGCCAGGAGGGGGGGA
TTCGTTAGGATCTTCCCTTCGCAGAACAGCTGGCAGAAGTACTCACAGTATTTAGACCCG
GTGACCGGCATCCCGGTCTGCTCGACGTCTCTCAACAACAACACGCCGTATACCGTCATA
CATAACTACAATCTGTTGGTCCACTCGCACGTGCTGCCGCACTTCCAGCACGCGACCGTC
GCCACCAGCCTCACAGACACACCGGAGAGATTGAAGCGATATGAGGCAGCCTGTATAGCG
GGTGCTGCGCCCGCCGTTCAGCTCTCAGAGCCGGCGACCCCGGCGCCCCGGGACGCCAGG
AGGGCTAAGGACCTGGTCAAGAGACAGCTGGCCGAAGGAATGACGCTCACTCGAGGCGAG
GTCCGTCGTGCGTTCGGTATGTACCTGACGCACGTCCTGAAGCGCATCTCGTCCCCCTGC
ACGGAGCAGGGCGCCCAACACGCCGCGCTGGTGCTGCGCTTCCTCCGCCGAGCCTCCGCT
TCACTCCGCATGCCATATAATGTAAAGCCCGAGCGGCGGGCACCTGCCGCCCGTCGCTCG
GAGTGTTACATCTAA
Protein sequence:
MRRHDDETHNGKEKENEGSISDWVSGGPIGSKGAVLVFRSCVLATRTPSVESTTKTVGNN
TGTTILLNKAKNMARRLVAEPHAFSVRPKNIMHDVMETFGNSNKYTGQAFVVRHVSEAEV
PETMSVDDQGHERTEHKRDIDDVLNDLNKITLKKNLNIENTTANIKPPDDPMTVNKDKED
KKGKKSKGKNKRKNTHNQRPVSPALDSDDSEHMLVKEVDSVKVLDSNNMPARMLKITYRL
VNTETKLLHRLLQAHGLQEASSEAKDFNLMWAGLHPKPDVLRSLTPYQRVNHFPRVNLVK
KLLDGHGLLEAHPESATWTLFWSTNLTPFEVLRSLTTMQKVNHLPRSYELTRKDKLFKNI
EKMQYFRGLKHFDFIPTTFLMPNEYKELCTTHYRTKGPWIVKPAASSRGRGIYIVNTPEQ
IPKGENVVVAKYIDKPLLIGGHKCDLRLYVCVTSIDPLLIYLYEEGLVRFATVKYDKTNK
NLWNPCMHLCNYSINKYHTDYIKCDDPNAGNIGHKWTLSALLRHLRKQGRNTSALMAAIE
DLVVKSILSSAQTITAAARVFVPSLFNCFELFGYDILVDDMLKPWLLEINLSPSLACESP
LDARVKSALLADTLTLVGLPAVPGNRQEQLGPQATSLKMRIGACRRVHSAENACVRNKSG
GPGAGAGSGVPGAGPLGNLLTGEELRIVRAVRAQYARRGGFVRIFPSQNSWQKYSQYLDP
VTGIPVCSTSLNNNTPYTVIHNYNLLVHSHVLPHFQHATVATSLTDTPERLKRYEAACIA
GAAPAVQLSEPATPAPRDARRAKDLVKRQLAEGMTLTRGEVRRAFGMYLTHVLKRISSPC
TEQGAQHAALVLRFLRRASASLRMPYNVKPERRAPAARRSECYI