| New model in OGS2.0 | DPOGS204037 |
|---|---|
| Genomic Position | scaffold452:+ 81942-87863 |
| See gene structure | |
| CDS Length | 2214 |
| Paired RNAseq reads | 2093 |
| Single RNAseq reads | 4734 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004785 (2e-167) |
| Best Drosophila hit | CG10221 (1e-144) |
| Best Human hit | protein sel-1 homolog 1 precursor (1e-145) |
| Best NR hit (blastp) | PREDICTED: similar to Sel1l protein [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Sel1l protein [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005488 binding |
| InterPro families | IPR006597 Sel1-like IPR011990 Tetratricopeptide-like helical |
| Orthology group | MCL11122 |
Nucleotide sequence:
ATGAACCGATTAAAACTATATGTTTTGTTGTTGTGCTTTGTGCTGTCGGCGGCTGAGTTA
AAAGGTCCCGATGGTCAAAAAACATCAGATAAGACGGAGAATAAGGACAGTGAGGATACC
TCGGTCCCTAAAACGAAATCAGATCAAGAGACCTATAAAGATCTAACTAATGCTCTCAAC
AAGGAAATACAGTTTTTACAAGACTACGCGACCGCTATACAAATATCCAAAGCTTTTGAT
CAGGAAATTGAGCCAGAAATTGATCTGCAAAAAATGGAAACACAATTGGAAAAGTTGAAA
GATTTAAAGACTACTTTATTAAACACTGCAGATCCAGCTTGGACTGAAGAAGAAAAGGAA
TCAGCAGGGAACAGCAAATCAGAGAAAAAGGAGTTCAATCCTCAAGAAATACTTGATGCA
TTGCAACCACTACCCGAGGAATTGGAGCTGGATTTGACAGCTGATATGAAAGAAGCCAAA
GCTCAGTATGAAGCCGCAATATCCAAGTTGGAGCGACGTGCTCCTGACCTCGTCGGTGCA
ATACTTCAAATTAAGCATTCAGCTGAACGTGGGTATATGCCGGCAAAAATCAAACTGGCA
TGGTCTTATATTTTTGGGGAAGGAGTCGAGCTTGATGTGGATAAGGCGAGGAAGATATTT
GAAGAGCTTTTAGAGAAAGGCAATGCTGAAGCTCATGCGGGCATGGGATTCCTTTACGCC
ACTGGTACATCGGTTCCAGTGTCTCAAGCTCGTGCTCTGGTCCACTACACTTTAGGAGCC
ATAGCTAATTCGGACTACGCCCAAATGGCCCTTGCATATAGATACTGGGCCGGTGTGACT
TTACCAGCCTCCTGTGAAAAGGCCATGGACCTCTATATGAAGGTTGCTCATAAAGTGGCC
GGCGGCGTGACCTTGAGCGGCGGCCTGGCCGTGCAGCGTGTGCGGCTGGTGGACGAGGCC
GAGGGAGGAGCCTCCGCCCTCGATACCGACCTCATAGAGTACTACCAGCTGCTGGCTGAG
AAGGGCGATGTGCAGGCACAGGTCGGCCTGGGGCAGCTTCACTTCACCGGGGGTCGCGGA
GTGACCCTCGACCTCAACAAGGCGCTGCATTACTTCACGCAGGCAGCTAAAACCGGAAAC
GCCGTCGCCAACGCGTTCCTGGGAAAGATATATCTGGAAGGCGGTGATGGTATTAAAGCC
GATAACGAGACGGCCATGAGATACTTCAAGAAGGCCGCCGAGATGAACAATCCCATAGGC
CAGAGCGGGCTGGGAGTGATGCATCTGCAGGGCCGTGGCGTCGCCAAGGACCCAACAGCC
GCCTTCAAGTACTTCGCCATGGCGGCCAACCAGGGCTGGGTTGAGGGACAACTACACCTC
GGGTTTATGTATTTCGGCGGTATCGGCGTCCGTCGGGACTTCAAGCAGGCGAATAAGTAC
TTCAGCCTGGCGTCCCAGTCCGGACACGTGCTGGCTCTATACCACCTGGCGCTGATGCAC
GCCCAGGGGCTCGGAGTCATGAGATCGTGCGCCACCGCCGTAGAGTTGTTGAAGAACGTC
TGCGAGCGCGGTCCGTGGAGCTCCCGTCTGATGTTAGCGCACGCGGCGTGGAGCGCCCGG
GACACGGACTCTTCCCTGCTGCAGTACCTGGCGCTGGCGGAGAGGGGCATGGAGGTGGCT
CAGAGCAACGCGGCCTACATCCTGGACGTAGGAGAGGGGAACGTGGACGCGGACACGAGA
CACGCGCGCGCGCTGCAGCTGTGGTCGCGGGCCGCCTCTCAAGGCTGCGCCGCCGCCCGC
GTCAAGCTCGGTGATTACCACTACTACGGGCTCGGCACGCCGAAGGACCTGGACGCCGCG
GCTCACCACTACCGCCTCGCCTCGGAGCACCTTCACTCGGCGCAGGCGACCTTCAACCTC
GGGTTCATGCACGAGCGAGGCCTAGGCCTGGTCAGGGACCTCCACCTCGCCAAGCGGTGT
TACGACCTGGCCGCGGACGCGTCTCCTGACGCCAGACTGCCCGCGGCACTGGCCCTGGCC
CGCCTACACGCACACTCCGCCATCGAATCCCTACTAGAAAGTCCTCTGGCAGTCATCTTC
ATATCGGGCGACTCCATACTGTTGTCCAACTGGGACCTCTATCTCATGACGGTGCTGGTC
GGAGCCCTCGGCTTCGTGATATACTTGCGGCGACCTCACCAGCAAGTCAACTGA
Protein sequence:
MNRLKLYVLLLCFVLSAAELKGPDGQKTSDKTENKDSEDTSVPKTKSDQETYKDLTNALN
KEIQFLQDYATAIQISKAFDQEIEPEIDLQKMETQLEKLKDLKTTLLNTADPAWTEEEKE
SAGNSKSEKKEFNPQEILDALQPLPEELELDLTADMKEAKAQYEAAISKLERRAPDLVGA
ILQIKHSAERGYMPAKIKLAWSYIFGEGVELDVDKARKIFEELLEKGNAEAHAGMGFLYA
TGTSVPVSQARALVHYTLGAIANSDYAQMALAYRYWAGVTLPASCEKAMDLYMKVAHKVA
GGVTLSGGLAVQRVRLVDEAEGGASALDTDLIEYYQLLAEKGDVQAQVGLGQLHFTGGRG
VTLDLNKALHYFTQAAKTGNAVANAFLGKIYLEGGDGIKADNETAMRYFKKAAEMNNPIG
QSGLGVMHLQGRGVAKDPTAAFKYFAMAANQGWVEGQLHLGFMYFGGIGVRRDFKQANKY
FSLASQSGHVLALYHLALMHAQGLGVMRSCATAVELLKNVCERGPWSSRLMLAHAAWSAR
DTDSSLLQYLALAERGMEVAQSNAAYILDVGEGNVDADTRHARALQLWSRAASQGCAAAR
VKLGDYHYYGLGTPKDLDAAAHHYRLASEHLHSAQATFNLGFMHERGLGLVRDLHLAKRC
YDLAADASPDARLPAALALARLHAHSAIESLLESPLAVIFISGDSILLSNWDLYLMTVLV
GALGFVIYLRRPHQQVN