New model in OGS2.0 | DPOGS216185  |
---|---|
Genomic Position | scaffold5622:+ 10841-13378 |
See gene structure | |
CDS Length | 1059 |
Paired RNAseq reads   | 89 |
Single RNAseq reads   | 1089 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000125 (8e-27) |
Best Drosophila hit   | lethal (2) essential for life, isoform A (9e-11) |
Best Human hit | three prime repair exonuclease 2 (1e-07) |
Best NR hit (blastp)   | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (9e-38) |
Best NR hit (blastx)   | 19.8 kDa small heat shock protein [Choristoneura fumiferana] (2e-26) |
GeneOntology terms    | GO:0009790 embryo development GO:0009408 response to heat |
InterPro families    | IPR002068 Heat shock protein Hsp20 IPR012337 Ribonuclease H-like IPR008978 HSP20-like chaperone IPR001436 Alpha crystallin/Heat shock protein |
Orthology group | MCL25385 |
Nucleotide sequence:
ATGAGTATTGAGACGTTTGTGTTCTTGGATATCAACACCGTTGGTTACAGTGTCAAAGAG
AAGAAAGGTGCTAAAATTACTGAGCTGACATTGATGGCAGTGTCACGTAAGGATATTGTA
AAAGCTGAAAGTGGGATTTTACCCCCATTTGGGAAACTGTCCCTGTTGATCAACCCACAA
AAAGACATACCAAGTCAAATAGCGAAATCGTCAGGATTATCGAACGTGTATTTAACGAAT
CAGCCAATTTTTAAAGACAAAGTGAGCACAATCAATTCATTCCTTGAGCTGCCTAAGCCA
GTGTGCCTCGTTGCTTGTAAAGGAAACAGATTCGATTATAAAATATTAAGATCGGAGTAT
GTGGAAGCCAACGCCCAGCTGCCAGATGATCTACTGTGTGTCGATCCAATCAGCTTGCTT
ACTGAAGAAATTAAAAGTAAGGTTAAAGATACAACAGCTCCATCGAGTGCCAACAATTCA
TTACTGGACACGCCAAACTTAAACGCCTCAGGGTTCCAGCCCGCTTCCCCATCAGCCCCC
AGCAATGAAAACCAGCCAGGACCGAGCAACATCGACGACCTAAATGACGCTTTTGCTGGT
ATGACGACAAACACAACTCCCAAGAAAGAGAGGTATACCGTACAAAAGATATACAAAAGT
GTTATCAACAGAGAGCCATCGAGATCCCAGAGGACTGATGTTACGGCTATGATGCTTTTG
GACCCGGCATTCATTACAAGAAAGCGATACGAGAAACACACTAGTGCTCTAGCGCTGCCT
GCAGACGGTTACATAGTCGTGGAAGGAAAACACGAAGAAAAGAAAGATGAACACGGCTTT
ATATCCCGGCAGTTCACTAGACGATACGCACTCCCGGAAGGTTGTAATCCAGACACAGTA
GAGTCACGGCTGTCTTCAGATGGAGTGCTGAGTGTTATTGCTCCGAAAGTGCCATCAGTA
TCTAAGAACGAACGAAGCGTCCCCATCGCCCAGACCGGACCCGTGAGGAAGGAGATCAAG
GATCAGAATTCACAAGCCGGAGCTGGTGATAATAAATGA
Protein sequence:
MSIETFVFLDINTVGYSVKEKKGAKITELTLMAVSRKDIVKAESGILPPFGKLSLLINPQ
KDIPSQIAKSSGLSNVYLTNQPIFKDKVSTINSFLELPKPVCLVACKGNRFDYKILRSEY
VEANAQLPDDLLCVDPISLLTEEIKSKVKDTTAPSSANNSLLDTPNLNASGFQPASPSAP
SNENQPGPSNIDDLNDAFAGMTTNTTPKKERYTVQKIYKSVINREPSRSQRTDVTAMMLL
DPAFITRKRYEKHTSALALPADGYIVVEGKHEEKKDEHGFISRQFTRRYALPEGCNPDTV
ESRLSSDGVLSVIAPKVPSVSKNERSVPIAQTGPVRKEIKDQNSQAGAGDNK