Genomic Position | scaffold1756:+ 25284-47158 |
---|---|
See gene structure | |
CDS Length | 2028 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 17 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | PREDICTED: polyprotein-like [Danio rerio] (1e-11) |
Best NR hit (blastx)   | reverse transcriptase [Bombyx mori] (4e-16) |
GeneOntology terms   | ND |
InterPro families   | ND |
Orthology group | MCL10002 |
Nucleotide sequence:
ATGGGTGTTTGGAGGATTGTCGCGTGGGCTTGGGTGGGAGGGGTAAGAGTTTTACCCTCG
CACCGAGTGAAAGTGGCCGCTGTTTTAGTAGGCACTAGGGCTAGAAAATCAAACGTTAAG
ACTTACTCTATCATTAAAGCGGCTTCGGATTGGACTATAATGATCGATACGTATGAGAAG
CAATATAAAATCCCAGAGGATATTTGTGCAATGGCGTCCAGACCGGACAAATTTCTATAT
TCGCGAATTTTAAAGCGCGTAGTGATTATAGAGCTCACGATTCCTTGGGAAACCAACATC
GCCAAAGACCATGCCATCAAGGTCAACAAGTATTACGAGCTCACTAACGAACTCAATAAG
AATAGGTTCGTTGTAAATTTGTACACGGTAGAAGTAGGAGCAAGAGGTATAACAGCCAAA
TCTCTCTACAACCTGCTAAAAAACTTCGGCCTGCCAAGAACTAACATCAGTTCATTCTTG
AAACGTGCGTCGAAGGCAGCCCTAGTAGGTTCTTTTCAAATTTGGTTAGGTAGAGAGAAG
AGCATGGATGGTAGAGGCCCCTTAAATCTACAACTGGGTCGCAAGTCCCAGGCAGTGTTG
AAGCTCCTCTCCCTGCAACGCGATGGACCCGACACCCGCACGGTGTATCCATGGAATGCT
GAGAGGGAAACTCTTTTTACGAGCCGTCCAGCCGGCCTTGGTGGAGCCGGAGGGTGTGTG
AGACTCGGCCTGGGCGGGCCCCTACGGGGCCATCCCGGCAATAAGGATTGCCCCGACGAC
GCCGGTCTTTCAGTGGAGCCGGGTTACCAGCCCGACCCCAGCCCGGAGCGCAGGGGTGCT
ATTGGAGGCGTTGAAATTACCCCCGACACACCCCTATGCCTCCATCGTGGACATTACCGT
CTCACAGAAGGAGGACATCGCCAGCCAGAACTCGTCACTTTCGAGCATCTTCTCCGCGAT
GCTCGAAAGCGACAAGTCCAACCCGCCGAGAGCCGACTCGAGATCTTGTCCCTGCGCAGC
CCATGTCGGGCACACCTCGAGGGTGTGCTGGGCCGTGTCCACCGCAGCATCACACTCGTG
ACAGCATTTTCCTGGCTCTCTCCTGGCCGTTCGACACAAATAGTCGCCGAAGCACCCATG
CCCGGTGAAGACCTGTGTCAGACGGAAAGACCGGGCGCAGCGCTGCCGTGGTACGTTTAT
CGTACGGTTACTCCGCCAGGTCCCGAATTAGGCGCACCTCCCCCTGCCGGCGCACAGCCC
GGATCTCCTCCGATGAAGTGTCCTACCCGAGACGTAGGCGAACACCTCGGCGCGAACCGC
CGCCACGAGAATTACTATAATATTCTCCTAACCGATTTTGTTCCTACCATAAAATTAAAT
GCGGAATACAAGATACTACGATCATACGATCCGGGATTATCGTTAGGCGGTCAATGCATT
TCTACGGTTACAGAAAATTCACCATTTAAATTTGTCGGTCGGAAGATTGATAATATAGGT
CGTACTCCATCTTCAGAAGGAATAGTAGATAGCTTTTTAAACGATCTCAACAAGTTAGAT
TCAGGCGTCATAAAGATGTTGAATTTGTGGCTCGGTCTCGCGCTAACGGCTGATTCATCG
GCTTTATTCAGGGATCACAATAGTTTCGGGATGAGTCAAAAAAGGCCATCGGAGCTCTAT
AAACCCCTGAGGGTTTCCAAGAGATATATCCTGGGGAAAACCCATGGTGGCGTCGTTACA
TTGCTTCCAAAAGACAAAGCCATAGTAACCACCCATCAGATAAAGTCTTGCCGCCAACCA
ATATTGGGTTGTGGTATGCTGCTATCCAACTGGTATATGACCCTAATACGCCGATATTTT
CGTAGGGTGCTTGTGGTGCGAGAGTATGGTAGGATGCTGTTGGTGCTGCGCCGTAGTCTT
CGTATTAAAGCACCAGACCTTTTGCGCATAGTAGCGAAGAAACAATTAGCCCGCGCTGTC
GCCAACATCCCTGACTACAGAAACAAGGCAGCCCCAGCAGCACCCTAA
Protein sequence:
MGVWRIVAWAWVGGVRVLPSHRVKVAAVLVGTRARKSNVKTYSIIKAASDWTIMIDTYEK
QYKIPEDICAMASRPDKFLYSRILKRVVIIELTIPWETNIAKDHAIKVNKYYELTNELNK
NRFVVNLYTVEVGARGITAKSLYNLLKNFGLPRTNISSFLKRASKAALVGSFQIWLGREK
SMDGRGPLNLQLGRKSQAVLKLLSLQRDGPDTRTVYPWNAERETLFTSRPAGLGGAGGCV
RLGLGGPLRGHPGNKDCPDDAGLSVEPGYQPDPSPERRGAIGGVEITPDTPLCLHRGHYR
LTEGGHRQPELVTFEHLLRDARKRQVQPAESRLEILSLRSPCRAHLEGVLGRVHRSITLV
TAFSWLSPGRSTQIVAEAPMPGEDLCQTERPGAALPWYVYRTVTPPGPELGAPPPAGAQP
GSPPMKCPTRDVGEHLGANRRHENYYNILLTDFVPTIKLNAEYKILRSYDPGLSLGGQCI
STVTENSPFKFVGRKIDNIGRTPSSEGIVDSFLNDLNKLDSGVIKMLNLWLGLALTADSS
ALFRDHNSFGMSQKRPSELYKPLRVSKRYILGKTHGGVVTLLPKDKAIVTTHQIKSCRQP
ILGCGMLLSNWYMTLIRRYFRRVLVVREYGRMLLVLRRSLRIKAPDLLRIVAKKQLARAV
ANIPDYRNKAAPAAP