| New model in OGS2.0 | DPOGS209643 |
|---|---|
| Genomic Position | scaffold4867:+ 5172-6911 |
| See gene structure | |
| CDS Length | 1008 |
| Paired RNAseq reads | 243 |
| Single RNAseq reads | 699 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006706 (1e-149) |
| Best Drosophila hit | Rabenosyn-5 (7e-75) |
| Best Human hit | rabenosyn-5 (1e-39) |
| Best NR hit (blastp) | rabenosyn-5 [Culex quinquefasciatus] (2e-85) |
| Best NR hit (blastx) | rabenosyn-5 [Culex quinquefasciatus] (4e-83) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0035088 establishment or maintenance of apical/basal cell polarity GO:0005768 endosome GO:0008103 oocyte microtubule cytoskeleton polarization GO:0045451 pole plasm oskar mRNA localization GO:0006897 endocytosis GO:0034058 endosomal vesicle fusion |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR011011 Zinc finger, FYVE/PHD-type IPR017455 Zinc finger, FYVE-related IPR000306 Zinc finger, FYVE-type IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL14831 |
Nucleotide sequence:
ATGGCAGCATCAAATGAGGAAGAAATTTTGGAGGGCTTTCTGTGTCCAATTTGCAAAGCA
GATTTAAAATCAGCTAGCCAGCTTACCAATCATTTTGAAAACTTGCACCAAGAAGATCAG
GACGTTCTCAAATCATTGAAGGAAATATTTGGTAAAGCAAAGAAGATAATTTTAAACAAT
GACGATACAGATTTGAAGGAAACCTTTGATCGCGCCTTGAAGTTCAGTTCCCAAGAACAA
TATTATGCTAGGGAGGAGCAGACAGTTGGAGTGTCGCGAAGTTCCACTGATTATTTCAAG
GCTGTTCGTTCAGCTAGATTAGAGAGATATGCCACGGAAACTAATAAGTTGTTAATAAGA
TTAGATAAACTGGTATGTAATATGCCAAGTGATCCAAACCAAAGGAAACAGCATGAACAG
GAAGTTGTTCCTTGGTTGGATGGGTCGTCTGTGAAGTTATGTCCAAACTGTGCTAAAGCT
TTCAACCTGACGAGGCGGAAGCATCATTGTAGACTCTGTGGTTCAATTCTATGCCATGAC
TGTTCAGTGTTCTTAGATTTAAATGTTGCTAAAACAATAGTGGATCCGTCTGCACCTCCT
CAACCAGAAACATCAGCGGTCGAGAAGTTTGGTCTCCGTCTCTGTGAACACTGCTACAAC
CTGATTCAACTCCGACGGCAGATTCAAGAGAACAGGAATGTGAAGACTGTGTTAATGTCA
GCCTACGAACAGATGAGGAGCTTGATGGAACAAGCTACGCCAGCTGTTGAAATGTATGAG
AAGATGTGTCAGAGTTTGTTTGACGGGGAGACCATATACAGTCTGTCCGATGTGAACGCT
ATGCGCGGTCGTATAGGGAAGCTGGCTGAGGGTATCGATCTGTTGAGCAAGCACATAGCG
AGCCTGCCGGTACAGCCGGGGACGAGACAAGCCAAGCTCCAGAACTCTATCAGACAGGCC
TCCGCACACTATATCAAGGTATATCTAATACATATAAGTATAGTATGA
Protein sequence:
MAASNEEEILEGFLCPICKADLKSASQLTNHFENLHQEDQDVLKSLKEIFGKAKKIILNN
DDTDLKETFDRALKFSSQEQYYAREEQTVGVSRSSTDYFKAVRSARLERYATETNKLLIR
LDKLVCNMPSDPNQRKQHEQEVVPWLDGSSVKLCPNCAKAFNLTRRKHHCRLCGSILCHD
CSVFLDLNVAKTIVDPSAPPQPETSAVEKFGLRLCEHCYNLIQLRRQIQENRNVKTVLMS
AYEQMRSLMEQATPAVEMYEKMCQSLFDGETIYSLSDVNAMRGRIGKLAEGIDLLSKHIA
SLPVQPGTRQAKLQNSIRQASAHYIKVYLIHISIV