| New model in OGS2.0 | DPOGS213661 |
|---|---|
| Genomic Position | scaffold3230:+ 8462-18467 |
| See gene structure | |
| CDS Length | 1026 |
| Paired RNAseq reads | 134 |
| Single RNAseq reads | 586 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010611 (6e-126) |
| Best Drosophila hit | CG9743 (5e-79) |
| Best Human hit | stearoyl-CoA desaturase 5 isoform a (2e-60) |
| Best NR hit (blastp) | desaturase [Spodoptera littoralis] (2e-144) |
| Best NR hit (blastx) | desaturase [Spodoptera littoralis] (8e-139) |
| GeneOntology terms | GO:0004768 stearoyl-CoA 9-desaturase activity GO:0055114 oxidation reduction GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water GO:0006629 lipid metabolic process |
| InterPro families | IPR015876 Fatty acid desaturase, type 1, core IPR005804 Fatty acid desaturase, type 1 |
| Orthology group | MCL16900 |
Nucleotide sequence:
ATGAGACAAAAAACTAAACACAGTATAGCTGATCAGTTAAATGAAGATATTATTGATAAC
AAAAGTGACAGTGATTTTGATTTAATGAAATATGAAGCTCTAGAATTTAAACCACGAATT
AAATGGCCGGATTTATTAGTTCAGCTGTGCTTACATTCGACAACAGTTTATGGCTTCTAC
CTCATACTAGTTAATCGAGTGAAATTATATACTATATTATTTGTTTTTTTTACTATATAC
ACATCGGGCTTCGGTATTACAGCCGGCGTGCACAGGCTGTGGTCGCACAGAGCGTACAAA
GCGAATCTGCCTTTAAGAATTTTACTCGCACTGCTATTCACTGTCACTGGACAGCGCGAT
ATTTATACATGGGCCTTGGATCATCGGGTTCATCATAAGTACACTGAAACCGTGGCGGAT
CCTCACGACGTGAGACGTGGGTTCTGGTTCGCTCACGTTGGCTGGCTGGTGCTGACCCCC
CACCCTGCCGTTGAAGATCGAAGGATCTCATTGAGAAAAACGTCGCTGGACTTGCTCGCT
GATCCAGTTGTTAGATGGCAGAAAATATTTTTTATTCCATTATTTGTACTACTGAATGTC
TTCCTACCGATCGCTATTCCTGTTTATTTTTGGCACGAGAGCTACATCAACAGTTTCGTG
TTGAGCTTCGTTACGAGATTCACAATCACGCTGAACATTGCCTACAGCGTGAACAGTTTC
GCTCACATGTGGGGAAATAAACCTTACGACAGATTCATAAAATCTGTGGAGAACAGAATA
GTCAGTTTGGCAGCTTTGGGCGAGGGGTGGCACAATTACCACCACGTGTTCCCCTGGGAC
TATCGGACTTCGGAACTAGGAATGATTAATATATCCACAACCTTCATAGATGCGTTCGCA
AAAATTGGATGGGCTTATGATCTGAAAGTAGCTACGAATGAGATGATAAGGAACCGAGCG
AGACGGAATGGTGATAGAAGTCTGCGACATCTTGAGGAACCAGATCCGAGTGTCTCATCC
GAATAG
Protein sequence:
MRQKTKHSIADQLNEDIIDNKSDSDFDLMKYEALEFKPRIKWPDLLVQLCLHSTTVYGFY
LILVNRVKLYTILFVFFTIYTSGFGITAGVHRLWSHRAYKANLPLRILLALLFTVTGQRD
IYTWALDHRVHHKYTETVADPHDVRRGFWFAHVGWLVLTPHPAVEDRRISLRKTSLDLLA
DPVVRWQKIFFIPLFVLLNVFLPIAIPVYFWHESYINSFVLSFVTRFTITLNIAYSVNSF
AHMWGNKPYDRFIKSVENRIVSLAALGEGWHNYHHVFPWDYRTSELGMINISTTFIDAFA
KIGWAYDLKVATNEMIRNRARRNGDRSLRHLEEPDPSVSSE