New model in OGS2.0 | DPOGS205140  |
---|---|
Genomic Position | scaffold1589:- 11609-16738 |
See gene structure | |
CDS Length | 2424 |
Paired RNAseq reads   | 8 |
Single RNAseq reads   | 20 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008617 (3e-23) |
Best Drosophila hit   | ND |
Best Human hit | zinc finger BED domain-containing protein 6 (2e-10) |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (3e-108) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (1e-99) |
GeneOntology terms    | GO:0016481 negative regulation of transcription GO:0046983 protein dimerization activity GO:0005730 nucleolus GO:0005634 nucleus GO:0016564 transcription repressor activity GO:0046872 metal ion binding GO:0003677 DNA binding |
InterPro families    | IPR012337 Ribonuclease H-like IPR000477 Reverse transcriptase |
Orthology group | MCL10020 |
Nucleotide sequence:
ATGGCAAGATTCAGAAAAGGCTTCTCCACCATCGACCACATCCACACACTCGAACTTATC
ATCGAGAAATATCAAGAGAGAAGTAGACCATTGTACTTGGCTTACATCGATTACAAAAAA
GCATTCGATTCGGTGTCACACAACTATATCTGGGAAACTCTAGCAACACAGAATGTGGAA
AATGAGTATATAAGAGTTGTCAAAAGCATATACAGCCACCTACGTTTTGCCGACGACTTG
GTACTGATATCAGAGACAGTAAAAGAACTACAACACATGGTAGAGTTACTAAACCAAGCG
AGCAAGGTCGCCGGGCTAGAAATGAACCTCACTAAAACTATGGTAATGACCAACAACATC
AAGGTACCAATTTACGTCGACAACGTGCCTCTCCCATATACGGAAAAATACATTTACCTA
GGCAAACAAATAAGCTTCAACAGACAAAACAACTACCAGGAGATTGAGCGCAGAGCCCAG
TTGACATGGAATAAGTACTGGAGCTTTAAAGAAATATTTAAGAGCAACATGCCAATCAAA
CTGAAGACTAAGGTTATGAATTCCTGCCTTATACCATGCCTAACCTATGCTTGTCAGACA
TGGAAGTTTAACAAAAATGTCAAAGAAAAAATTATAACGTGCCAACGAGGAATGGAGCGG
AGTATGCTAAACATAAAGAGAATAAACAAAATAAGACATACAAAAATACGCAACATCACA
AAAGCAACAGACGGTTTAGCACAAGCTCTGGCGTTAAAATGGAAGTGGGCCGGACACATA
GCACGCCTGCAAGATCACAGATTGACAAGAAAAGTGTCAGAATGGAGGGGGCCAGTGGGC
AAAAGAAAGAAAGGGAGACCTTGCAACAGATGGGGTGACGAGATAAAACCAAACTGGATG
CAAATAGCGCAATCCAGAGAAAATTGGCTACATTTGGAGGAGGCCTTTACCTGCAGAGGG
ATAAATGATAATATCTCTACTTTGTCGACATTAAAGGAGAAATTTGGAGAAGATGATGTT
TTGAGTTTGACTAGTTCAAAAGAGCGCTGTGATTCCGACCTAGAAAGTAAAGCTTCATCA
TCAGTATCATTGCAAAAGTCAAAACTTAATCAATTAACTCTGGATTCATGTGTTAATAAT
ATTAAAACATTTAGTGAAAAAGTTGTAGATGTTGTTACTGATAACGGTGCAAATATCGTC
AAAGCCGTAACAATCGCATTTGGCAAACAAAAACACTTATGGTGTTTCGCCCACACCTTA
AATTTGGTAGCTCAAAAACCTTTTGACGAGAAAGGTGGTATTGAAAATACCCAACAGTTA
CTTAACATTGTAAAAGACATAACTAGATATTGTAAACAAAATCCAAATGTTGCTGATGCT
CTTCCCAAAGCGCAAAATGATGTGGCAGTACCACTGAAATTGATTCAGTCTGTTTGCACG
CGATGGAATTCAATTTACTATCAGCTAGTTCGATTTGTAAAGTTATCAAATCTACTTGCT
CCAATATTACTTAACCACCCGAAAGATCCGCCAATGTTAACAGCCAGTCAACTGGATAGT
ATTAGAGATCTTATAAATATTTTAAAACCTATGGAAGCTGTGACAAAAGAAGTATGTGTA
GAAAAATTTGTAACATCAAGCAAAATTATACCAATAGTATCCTGTCTTTTAAAAACATAT
AGTGCTATGAAGACGGAAATGGATGTTGGCTCTGCAACCAAAAATTTAATATTGGAAGAA
TTAAGTAGGAGATTCGGTACAATGGAACAAGTTCATGTGTTAGCTACCACGACACTACTG
GATCCGAGAGGTGAATCAGGATTCCGAGCGGCAGGCATTGTCCCATATAACCCCGACCAT
TTCACTGAAGAAGATTTTATCGCAGCTGAAGTGTTAGCTCAACCTGCTGTTATAGTTCAA
GATTCATCCATGGTTATACCTTCATCTACTTCAGTTAATCCAATGACAGCCACATCATCT
AATGCAATTATTCCAGCGCCATCGACATCATCTGCTACCATAGATCCTGTGCCATTGACA
TCATCTGCTACTATAGATACAAGGCTGCTTACATCTCCCACAGTAATGAATGCAACGCCA
TCCACTTCGTCCGGAAATATACAATCAAATATCGCAAATCTGCTTCCATTTCCGACCCAA
ACAACTCGTGAAAGACTCGTAAAGAAAGGACAAATGAAGCAACGCGCAAAGATTTTAACA
TCAACACCCGTTAGAGATAGTCTCATAGAAAAAGAAAATAAGAAAGCCACAAAAGCAGCA
AAAACTGTAAAAACTTCTAAACCATCAAAAGACAAAAATGCAGCACCGAAAGCTAAAGGA
AAACAGAAAAAAAAGTCGCAAATAAGGCCAAAAGACGCGTGCTGCAGGAGTCTAACAGCT
CTTCGGATCAGACATCAGTCTTAA
Protein sequence:
MARFRKGFSTIDHIHTLELIIEKYQERSRPLYLAYIDYKKAFDSVSHNYIWETLATQNVE
NEYIRVVKSIYSHLRFADDLVLISETVKELQHMVELLNQASKVAGLEMNLTKTMVMTNNI
KVPIYVDNVPLPYTEKYIYLGKQISFNRQNNYQEIERRAQLTWNKYWSFKEIFKSNMPIK
LKTKVMNSCLIPCLTYACQTWKFNKNVKEKIITCQRGMERSMLNIKRINKIRHTKIRNIT
KATDGLAQALALKWKWAGHIARLQDHRLTRKVSEWRGPVGKRKKGRPCNRWGDEIKPNWM
QIAQSRENWLHLEEAFTCRGINDNISTLSTLKEKFGEDDVLSLTSSKERCDSDLESKASS
SVSLQKSKLNQLTLDSCVNNIKTFSEKVVDVVTDNGANIVKAVTIAFGKQKHLWCFAHTL
NLVAQKPFDEKGGIENTQQLLNIVKDITRYCKQNPNVADALPKAQNDVAVPLKLIQSVCT
RWNSIYYQLVRFVKLSNLLAPILLNHPKDPPMLTASQLDSIRDLINILKPMEAVTKEVCV
EKFVTSSKIIPIVSCLLKTYSAMKTEMDVGSATKNLILEELSRRFGTMEQVHVLATTTLL
DPRGESGFRAAGIVPYNPDHFTEEDFIAAEVLAQPAVIVQDSSMVIPSSTSVNPMTATSS
NAIIPAPSTSSATIDPVPLTSSATIDTRLLTSPTVMNATPSTSSGNIQSNIANLLPFPTQ
TTRERLVKKGQMKQRAKILTSTPVRDSLIEKENKKATKAAKTVKTSKPSKDKNAAPKAKG
KQKKKSQIRPKDACCRSLTALRIRHQS