| New model in OGS2.0 | DPOGS208884 |
|---|---|
| Genomic Position | scaffold1599:+ 6222-15125 |
| See gene structure | |
| CDS Length | 645 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 102 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012416 (2e-89) |
| Best Drosophila hit | nicotinic acetylcholine receptor alpha 80B (7e-112) |
| Best Human hit | neuronal acetylcholine receptor subunit alpha-4 precursor (9e-62) |
| Best NR hit (blastp) | nicotinic acetylcholine receptor subunit alpha 4 isoform 2 [Bombyx mori] (3e-117) |
| Best NR hit (blastx) | nicotinic acetylcholine receptor subunit alpha 4 isoform 2 [Bombyx mori] (2e-118) |
| GeneOntology terms | GO:0005892 nicotinic acetylcholine-gated receptor-channel complex GO:0004889 nicotinic acetylcholine-activated cation-selective channel activity GO:0045211 postsynaptic membrane GO:0006811 ion transport |
| InterPro families | IPR018000 Neurotransmitter-gated ion-channel, conserved site IPR006201 Neurotransmitter-gated ion-channel IPR002394 Nicotinic acetylcholine receptor IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR006029 Neurotransmitter-gated ion-channel transmembrane domain |
| Orthology group | ND |
Nucleotide sequence:
ATGACAACGAACCTATGGGTGGAGCAGTCGTGGTATGACTACAAGCTTCGCTGGGAGCCT
CGCGAGTACGGCGGAGTGCACATGCTGCATGTGCCCTCCGATCATATATGGAGACCAGAC
ATCGTGCTTTACAACAATGCCGACGGTAACTTCGAGGTAACGTTGGCGACCAAGGCGACC
ATCTATCACCAAGGGCTGGTCGAATGGAAACCACCCGCTATTTACAAGTCCTCCTGCGAA
ATAGACGTGGAATATTTTCCTTTCGACGAGCAAACATGCGTTCTTAAGTTCGGTAGCTGG
ACGTACGACGGATTCAAGGTGGACTTGAGGCATATGGATGAGCAAGCTGGGAGTAATGTG
GTGTCCATGGGAGTTGATCTATCAGAGTTCTATATGTCCGTGGAATGGGACATTTTAGAA
GTACCAGCTGTTAGGAACGAGAAGTTTTACACGTGTTGCGACGAGCCCTACTTGGATATA
ACGTTCAACATTACACTAAGACGCAAGACGCTGTTCTACACCGTCAATATTATCATACCT
TGTATGGGTATATCGTTCCTTACCATACTTACCTTTTACTTGCCTTCTGACAGCGGCGAA
AAGGTATTTATACTAAAACTTTACAATATTTATATAGCCTATTAG
Protein sequence:
MTTNLWVEQSWYDYKLRWEPREYGGVHMLHVPSDHIWRPDIVLYNNADGNFEVTLATKAT
IYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVDLRHMDEQAGSNV
VSMGVDLSEFYMSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITLRRKTLFYTVNIIIP
CMGISFLTILTFYLPSDSGEKVFILKLYNIYIAY