New model in OGS2.0 | DPOGS207711  |
---|---|
Genomic Position | scaffold1951:- 24466-28633 |
See gene structure | |
CDS Length | 1515 |
Paired RNAseq reads   | 256 |
Single RNAseq reads   | 1550 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009811 (7e-26) |
Best Drosophila hit   | CG13344 (6e-42) |
Best Human hit | E3 ubiquitin-protein ligase RNF25 (7e-21) |
Best NR hit (blastp)   | hypothetical protein AaeL_AAEL011413 [Aedes aegypti] (3e-68) |
Best NR hit (blastx)   | hypothetical protein AaeL_AAEL011413 [Aedes aegypti] (2e-54) |
GeneOntology terms    | GO:0005515 protein binding GO:0008270 zinc ion binding |
InterPro families    | IPR016135 Ubiquitin-conjugating enzyme/RWD-like IPR001841 Zinc finger, RING-type IPR006575 RWD domain IPR013083 Zinc finger, RING/FYVE/PHD-type |
Orthology group | MCL14898 |
Nucleotide sequence:
ATGTCGGCTACAATTGATAATCGAGTTTACGATGAACTGGAAGCTCTAGAAGCCATCTTG
ATCGAAGATTTTGCTGTAAAGCATGAAGACGGTGTACCTAGAATCATTGAAACTGTAGTA
CACCCTTCAACAGGAGATCAAATCGATCAACAATACGTGTGCTTGACATTAGAAGTCAAG
TTGTCTCCTGATTACCCCGATACCATACCAGAGGTGTTCCTCAGGAACCCCCGCGGCCTG
GATGACAAGTTGTTGAACAACATTAATTCAAGAATCAAAAATAAACTGGATAGACATATT
GGCAACCCAATTGTTTTTGAACTTATAGAGATTGTTCGTGAGTATCTAACAGCTTGCAAT
CTGCCCCGTGGACAATGTGCCATTTGTCTCCATGGTTTTGTGAAGGGGGATGTGTTTGTG
AAAACACCATGCTACCATCACTTCCACAGCCACTGCTTCCATAAGCACCTCGTCAATAGC
AGGAAATATTATGAAGAAGAGATGGAGAAACTTCCTAACTGGCAACGAGCTCAGGCTCCA
GAATATCAGCAAACTTGTCCAGTTTGTCGTAACGTTGTGTCCTTTGATGAGAAGGTTCTA
GAACAGGCCCCACCACCCGTTGAGTCTCTGGATGCACCACCGTTTCGCTTAACTCCTGAA
ATGAAGGCTCTGCAGCGTAGTATGTCTGAAGTGTTGGAGCGTCAGATTGCTCGAGGTGGT
GTTGTAGGTATGGGTGATGATGGCCCACCACTACTAACCATCACCACATCAGCTGATAAG
GAAAAAGCCTCCACTAGTGGAACCCAGGGGGCAAAGGCCGAGGCGAACCGCGCTGTACCG
AGTACTTCAGCCGAGAACCCTGAGAAGGCCCAGCCATACAGCGGACCATACCGCGGGTTC
AATCGTCGCGGGAAGCCCGGACGAGGACGTCGTGGCCGCGGCGCTCCGCGATCCATTGTT
AATAAATTCGATCTGATCAAGTTTTACAAACATTTGGTTATTGAAACTTTAAACTTATAT
ATTATTTTCCGAATGAAAAAATTTTTCAATTCTCGCTGCAAGGAAACATGTATAGTACTC
GTGTGTGTTTCAATTCCATGTGTATTTGGATTGCATTTTGGATCGTTGCTTGTACTCAAG
AATGGATCTGTTACAATAAATCTGTCATCAGCTCACGTCGTTTCTCCCACTACAGAAACT
CTTCAACATCATTGTACCAAACTTACCGCTATGTTCACTGGTTCTTCATACAAGTGGTCA
CCGGGACGGAATCTCCTTGGAAATGTTTTAACTACCTCGATAATTGCAATGTTAAATTTA
ATCAAAGATGGCGCTCAAATCACTCAGACAACAGTGAAGTCTCCGAGTTATATTCGAGAA
ACGAAATTATCTACAGAGTTTTTATATGGATTTGAGATTTCAGTGGATTATTTTGAATTT
AAAAAAAGCTTTAATGATTGTCCTTCGACCAAGTTCAAGTTCATGTTTCTGAACGGATTT
GGCGATAAAGTCTAG
Protein sequence:
MSATIDNRVYDELEALEAILIEDFAVKHEDGVPRIIETVVHPSTGDQIDQQYVCLTLEVK
LSPDYPDTIPEVFLRNPRGLDDKLLNNINSRIKNKLDRHIGNPIVFELIEIVREYLTACN
LPRGQCAICLHGFVKGDVFVKTPCYHHFHSHCFHKHLVNSRKYYEEEMEKLPNWQRAQAP
EYQQTCPVCRNVVSFDEKVLEQAPPPVESLDAPPFRLTPEMKALQRSMSEVLERQIARGG
VVGMGDDGPPLLTITTSADKEKASTSGTQGAKAEANRAVPSTSAENPEKAQPYSGPYRGF
NRRGKPGRGRRGRGAPRSIVNKFDLIKFYKHLVIETLNLYIIFRMKKFFNSRCKETCIVL
VCVSIPCVFGLHFGSLLVLKNGSVTINLSSAHVVSPTTETLQHHCTKLTAMFTGSSYKWS
PGRNLLGNVLTTSIIAMLNLIKDGAQITQTTVKSPSYIRETKLSTEFLYGFEISVDYFEF
KKSFNDCPSTKFKFMFLNGFGDKV