| New model in OGS2.0 | DPOGS207650 |
|---|---|
| Genomic Position | scaffold1953:- 23421-24322 |
| See gene structure | |
| CDS Length | 435 |
| Paired RNAseq reads | 211 |
| Single RNAseq reads | 1183 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | cornichon, isoform B (2e-45) |
| Best Human hit | protein cornichon homolog (1e-40) |
| Best NR hit (blastp) | PREDICTED: similar to cornichon protein, putative [Tribolium castaneum] (1e-66) |
| Best NR hit (blastx) | PREDICTED: similar to cornichon protein, putative [Tribolium castaneum] (2e-47) |
| GeneOntology terms | GO:0030722 establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification GO:0009953 dorsal/ventral pattern formation GO:0045450 bicoid mRNA localization GO:0008298 intracellular mRNA localization GO:0009952 anterior/posterior pattern formation GO:0045451 pole plasm oskar mRNA localization GO:0007350 blastoderm segmentation GO:0007314 oocyte anterior/posterior axis specification GO:0007310 oocyte dorsal/ventral axis specification GO:0008069 dorsal/ventral axis specification, ovarian follicular epithelium GO:0005887 integral to plasma membrane GO:0009950 dorsal/ventral axis specification GO:0046843 dorsal appendage formation GO:0008314 gurken receptor signaling pathway GO:0016020 membrane GO:0023034 intracellular signaling pathway GO:0006888 ER to Golgi vesicle-mediated transport GO:0016192 vesicle-mediated transport |
| InterPro families | IPR003377 Cornichon |
| Orthology group | MCL16065 |
Nucleotide sequence:
ATGGCGTTTAGCTTTCCAGCCTTTTCTTATATTATAGCATTAATTGTAGACGCTTTTTTA
ATATTTTTTAGTATATTTCATGTAATAGCGTTTGATGAATTAAAGACGGATTATAAGAAT
CCAATTGATCAGTGCAACAGTCTCAATCCTTTGGTGCTGCCGGAGTATTTACTGCATTTA
TTGATAAATCTTCTTTTCCTGCTCTCTGGAGAATGGTTTTCATTACTTATAAACGTTCCA
TTGATTCTCTATCATATTCACAGATATCGCACAAGACCTGTCATGTCTGGTCCAGGGTTG
TATGACCCTACGAGCATAATGAATGCTGACGTCCTAACGGTGTGTCAGAGAGAAGGCTGG
ATAAAATTAGCGTTCTATCTGCTTTCATTTTTCCTGTATCTTTATGGAATGATTGTGGTG
CTGATCGCCGTCTAG
Protein sequence:
MAFSFPAFSYIIALIVDAFLIFFSIFHVIAFDELKTDYKNPIDQCNSLNPLVLPEYLLHL
LINLLFLLSGEWFSLLINVPLILYHIHRYRTRPVMSGPGLYDPTSIMNADVLTVCQREGW
IKLAFYLLSFFLYLYGMIVVLIAV