| New model in OGS2.0 | DPOGS208771 |
|---|---|
| Genomic Position | scaffold2102:+ 35531-37237 |
| See gene structure | |
| CDS Length | 1707 |
| Paired RNAseq reads | 180 |
| Single RNAseq reads | 499 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007632 (4e-168) |
| Best Drosophila hit | CG34183 (4e-27) |
| Best Human hit | putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 (4e-30) |
| Best NR hit (blastp) | PREDICTED: RNA polymerase II associated protein 2 [Oryctolagus cuniculus] (3e-53) |
| Best NR hit (blastx) | PREDICTED: similar to RNA polymerase II-associated protein 2 [Tribolium castaneum] (4e-77) |
| GeneOntology terms | GO:0005634 nucleus GO:0016787 hydrolase activity GO:0016020 membrane GO:0004721 phosphoprotein phosphatase activity GO:0016021 integral to membrane GO:0046872 metal ion binding |
| InterPro families | IPR007308 Protein of unknown function DUF408 |
| Orthology group | MCL16441 |
Nucleotide sequence:
ATGGAATTTAAAAAAAGTACAAAGCGACCACCTAAAATCGAAGAAATGTCCAAGGAACAA
ATACGAAAAGCTATCATTAAAAAACGCGAGTGTAACGCCAAAGCACAAAACATAGTTGAA
AAATTACTTGAAAAGTGTGTGAATGAGGAATATTTTTTAAAATGCTTACTCGATATTAAC
CAAAGTCATTTCGATGATGTGATTGAGGAACGGTCTATATTACAACTATGTGGTTATCCA
TTATGTCAGAGAACATTGTTAGAGAAGGACATTCCTAAACAAAAATACAGGATATCGTTG
AAAACAAATAAGGTTTACGATATAACAACAAGGAAATGCTTCTGCAGTAACATCTGTTAC
AAATCGGCAATGCATGTTAAAAAACAAATGTTGACGAGTCCTTTATGGTTTAGGGAATAT
GAAGAAATACCGACAGGACAAGAGGTAGACTTGGGTGGACCCGCAAAAATAGAAATAAAT
AAAGATGATTTTATCACCACTTCACAATTCACTAAATCCAGCTTTCAGCATGCATCTGAT
ATTGTAGATTCAAATAAGATTGATGTCCATAAAATTGAAACTAAATTATTAACCAATAGT
ACGGATGTAATAGGAAGCAACATAGTCAATACTAATGATGAAAATATTACACCCAGTAAT
CATTTAGAATCTTCTAAACCGTCATACACACAGGAACCTGATGTGAGGAAGAAACCTAAT
AAGAAAACAACAAACCCATTAAATATTGTTGGTGATATAGTGGAGAAACCAGAGAAACAG
ATTGACCCTATACTCATTAATAGACCTTCAAGTAAAGACAAAGAACCTGAGAAACCAACC
ACCAGCTTAACCAGAACTATACATCAGAAGAAACCGCCTTCAATCACAGCCATAACAATA
AATGTAGAAAAATGTTTAGCGGAATGGTGTACGATTGACACACTGCTGTTTATATATGGG
GAGGAAAACGTAAAGAAAATGTTATCCAACAAAGGACAATTTATAACAGACTACTTAAAC
AATTACTCCAAAAGCATTTTCTACACTTCAAACACATACGACCAGTACCAAGCATTGTGC
CGCAAACTTAACTTGTTAGAATTAGAATCGAGACGACAAGATGCTCAGATATTAAATAAA
GAAACTAGACCATTACCAGATTATTCAATTCTGAAGGAAGAGAGTAAGAAAATACAGTTT
AAAGTCAGAGCCTTTTTTGCGGGAGAAATTGAAATCCCCGAACCAGAGGAGCCCACGGAG
GTTGATGCATCCAATGAACATGATAACTCAACTGTGTTACCACTAGTTGATAAGAATTCA
CAAAATGCACTGCGAAGGAAAATTGTTTGCCAGCATTTAAACAAGGTGTTGCCAGATTTA
TTACGATCACTTGGCTTATTAAATCTAACAATCAGTTCTGACATACGACTGCTTGTAAAT
ACATTCAAATTGAAAGCAGACAATATTATGTTCAAACCTATACAGTGGACATTGATCGCT
TTAGTGTTTATAAAATTGTTATCTATAAGGGACGAACAATTAAAAGGTTTACTGGAGCAT
GAAACGGCATTCAAACACATGCAGCTCTTGTTGCTCAGTTATAATCAAGACGGAGGTTAT
TTAGACAGGCTCATTTCTTGGTTGACCGATGTAAATAGGTTACTCGACGTAAATGATAAT
CAAATGACTATTGAAAAAAATATGTAG
Protein sequence:
MEFKKSTKRPPKIEEMSKEQIRKAIIKKRECNAKAQNIVEKLLEKCVNEEYFLKCLLDIN
QSHFDDVIEERSILQLCGYPLCQRTLLEKDIPKQKYRISLKTNKVYDITTRKCFCSNICY
KSAMHVKKQMLTSPLWFREYEEIPTGQEVDLGGPAKIEINKDDFITTSQFTKSSFQHASD
IVDSNKIDVHKIETKLLTNSTDVIGSNIVNTNDENITPSNHLESSKPSYTQEPDVRKKPN
KKTTNPLNIVGDIVEKPEKQIDPILINRPSSKDKEPEKPTTSLTRTIHQKKPPSITAITI
NVEKCLAEWCTIDTLLFIYGEENVKKMLSNKGQFITDYLNNYSKSIFYTSNTYDQYQALC
RKLNLLELESRRQDAQILNKETRPLPDYSILKEESKKIQFKVRAFFAGEIEIPEPEEPTE
VDASNEHDNSTVLPLVDKNSQNALRRKIVCQHLNKVLPDLLRSLGLLNLTISSDIRLLVN
TFKLKADNIMFKPIQWTLIALVFIKLLSIRDEQLKGLLEHETAFKHMQLLLLSYNQDGGY
LDRLISWLTDVNRLLDVNDNQMTIEKNM