| New model in OGS2.0 | DPOGS209711 |
|---|---|
| Genomic Position | scaffold744:- 12017-15455 |
| See gene structure | |
| CDS Length | 1230 |
| Paired RNAseq reads | 992 |
| Single RNAseq reads | 2678 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008922 (2e-67) |
| Best Drosophila hit | COP9 complex homolog subunit 4, isoform B (3e-166) |
| Best Human hit | COP9 signalosome complex subunit 4 (3e-167) |
| Best NR hit (blastp) | PREDICTED: similar to cop9 complex subunit [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to cop9 complex subunit [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0008180 signalosome |
| InterPro families | IPR000717 Proteasome component (PCI) domain IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | MCL14529 |
Nucleotide sequence:
ATGCCTCTTAATTTAGCAGGCGTTCGACAATACCTAAGTGATTTGAGAAATTCGGGAGGA
CTACACAAAGATCAGGCTGAAAAATACCGCAATGTATTACTTGAAATTTTAAAAAATCCT
GAAGGAGAACTAGCAGAGTGCTTAAAGGCATTTATAGAAGCGATTGTAAATGAGAATGTA
AGCCTGGTGATATCCAGGCAACTGCTTACCGATGTGAGCACTCATCTTGCCTTGCTACCA
GATAATGTGTCACAGGAGGTCTCACACTTTGCTTTGGATGTCATTCAACCAAGAGTTATA
TCTTTTGAGGAACAGGTGGCCAGTATTAGACAACATCTAGCAGATATATATGAAAGAAAT
CAAAATTGGAAAGAAGCAGCCAATGTTCTTGTTGGTATTCCATTGGAGACTGGACAGAAA
CAATATTCAGTGGATTATAAGTTGGAGACATACTTAAAGATAGCTCGGCTATATCTTGAA
GTGGATGACCCAGTACAGGCAGAGGCTTTTGTAAACAGAGCTTCATTGCTACAAGCTGAA
ACAACCAATGAGCAGTTGCAGATATATTATAAAGTCTGTTACGCAAGAGTGTTAGATTAT
AGGAGAAAATTCATTGAAGCAGCTCAGAGGTATAATGAACTGTCTTACCGTAACATAATA
CATGAGGATGAAAGGATGACATGTCTTAGGAATGCACTTATATGCACGGTGCTAGCATCG
GCTGGTCAGCAAAGATCGCGAATGCTGGCAACATTGTTCAAAGACGAACGCTGCCAACAA
TTGCCCGCATATTCCATATTAGAAAAAATGTACCTGGATCGCATCATTCGACGCTCAGAA
CTTCATGAGTTCGAAGCTCTAATGCAGACTCACCAAAAAGCGACGATGTCAGACGGGTCC
ACTATTTTGGACCGAGCTGTGTTCGAACACAACTTACTGTCAGCCAGCAAACTGTACAAC
AACATAACGTTCGAGGAGCTGGGAGCTCTACTAGAGACACCTCCAGCACGAGCTGAGAGA
ATCGCCTCACACATGATCAGTGAAGGAAGAATGAATGGATACATTGACCAGATCAGCGCT
GTTGTGCACTTTGAAACTCGTGAAATTCTTCCGCAATGGGACAAACAAATCCAAAGTCTC
TGCTACCAAGTTAACGGGCTGATTGAACAAATCGCTGCCGCAGAACCAGAGTGGATGGCC
AAGCTCATGGAAGAAGAGATGATTCAATGA
Protein sequence:
MPLNLAGVRQYLSDLRNSGGLHKDQAEKYRNVLLEILKNPEGELAECLKAFIEAIVNENV
SLVISRQLLTDVSTHLALLPDNVSQEVSHFALDVIQPRVISFEEQVASIRQHLADIYERN
QNWKEAANVLVGIPLETGQKQYSVDYKLETYLKIARLYLEVDDPVQAEAFVNRASLLQAE
TTNEQLQIYYKVCYARVLDYRRKFIEAAQRYNELSYRNIIHEDERMTCLRNALICTVLAS
AGQQRSRMLATLFKDERCQQLPAYSILEKMYLDRIIRRSELHEFEALMQTHQKATMSDGS
TILDRAVFEHNLLSASKLYNNITFEELGALLETPPARAERIASHMISEGRMNGYIDQISA
VVHFETREILPQWDKQIQSLCYQVNGLIEQIAAAEPEWMAKLMEEEMIQ