| New model in OGS2.0 | DPOGS213321 |
|---|---|
| Genomic Position | scaffold6405:+ 2527-4792 |
| See gene structure | |
| CDS Length | 1221 |
| Paired RNAseq reads | 543 |
| Single RNAseq reads | 1621 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013901 (7e-83) |
| Best Drosophila hit | CG10889 (7e-43) |
| Best Human hit | probable ribonuclease ZC3H12D (3e-41) |
| Best NR hit (blastp) | PREDICTED: similar to CG10889-PA isoform 1 [Apis mellifera] (3e-44) |
| Best NR hit (blastx) | predicted protein [Nematostella vectensis] (1e-42) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0003676 nucleic acid binding |
| InterPro families | IPR021869 Ribonuclease Zc3h12a-like |
| Orthology group | MCL40915 |
Nucleotide sequence:
ATGAAGAACAGAAAAAGGAGTATCCAGACATTGTTTAATCAACTTCGCAATGAAACAAAT
TCACTTAACAGCTCTATCATTGAAGTAGACCTTGAGTGTTCTAAACTTCAAGAGCAAAAT
ACTAATAAACACGATGAAAGTCTGATAATTATAGGCGACGATGATGACCTCATAAACAAT
GACTTGTGCCCCATCGAGTGCTCAACACCAAATACCAGAAGAACGAACGAAGTTGCCAAT
GACTCCATTATAAGCAATCACGAAGATGTCATCAACTTAACTAAGGAAATTAATATAGAT
TCTTACTTAACTATAGACCTTACAAACGACAGTTTAAATGGGACCGGCCAGTTCGGGAAC
ACTGTCATAGATTTAGATAGTAGCAAACAAACAGCTACACTGTCCACCGACAGCATATCT
ATGAGCGGTGACTCGGATGTAACAGTTATTAACATGAAAGAAAAAAGTAAAAACAATAAA
GATATTAAGAGGTTTGTTAATGGCATATCAAAAATGAGTTCCTGGGAGAAGGGTCGCTTG
TTAGAGGTTATCACACAGAAGATATTCAATGGATGCAAAAGTCCTTGCAGTACAAGGAGT
TGGAACAGCTGCAAGAATAGAATAGAAGGTAAGGAGACGGAAGAGAATCTGTACATAAAG
GAAGTGATTCTTGGCAAATCCCCTTCCCGTAATAGTATCGGCAGTAACATCTACAACCCC
GTGCGAGACAAACGGAACAGGACCGGATTGAGGATGGTAGTGATCGACGGAAGTAATGTA
GCAATGCAGCACACTAAGGGGCGGGTGTTCTCAGTGAGAGGTCTCAAGATCTGCATTGAT
TATTTCGTCAAACGCGGTCACATTGTAAAGGCATTTGTGCCTCACTTCAGGTGTAGGCAC
GGTAAAAGCACTGATGGTAAGCTGTTAAGTGAACTGGAAAGGCAGCAGCTGGTGGTGTAC
ACTCCGTCTAGAGAGGTGCAAGGAAAACTTATCACCTCCTACGACGACAGATACATCGTC
CAGTGCGCCGCGGAGTTCGACGGGGTCATAGTGTCCGGTGATAACTACAGAGATTTACTT
CAGGAGAATCCGAGGTGGAGGTTTGTCATAGAGAACAGACTTCTCCCGTTCACATGGGTG
GGGGACATGATCATGTTCCCGAAGGATCCCCTCGGCAGACACGGACCCCCCCTTGAACAG
TTCCTCAGGCATCCATCATAG
Protein sequence:
MKNRKRSIQTLFNQLRNETNSLNSSIIEVDLECSKLQEQNTNKHDESLIIIGDDDDLINN
DLCPIECSTPNTRRTNEVANDSIISNHEDVINLTKEINIDSYLTIDLTNDSLNGTGQFGN
TVIDLDSSKQTATLSTDSISMSGDSDVTVINMKEKSKNNKDIKRFVNGISKMSSWEKGRL
LEVITQKIFNGCKSPCSTRSWNSCKNRIEGKETEENLYIKEVILGKSPSRNSIGSNIYNP
VRDKRNRTGLRMVVIDGSNVAMQHTKGRVFSVRGLKICIDYFVKRGHIVKAFVPHFRCRH
GKSTDGKLLSELERQQLVVYTPSREVQGKLITSYDDRYIVQCAAEFDGVIVSGDNYRDLL
QENPRWRFVIENRLLPFTWVGDMIMFPKDPLGRHGPPLEQFLRHPS