| New model in OGS2.0 | DPOGS200228 |
|---|---|
| Genomic Position | scaffold3712:- 4450-15922 |
| See gene structure | |
| CDS Length | 1590 |
| Paired RNAseq reads | 4 |
| Single RNAseq reads | 9 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008437 (4e-155) |
| Best Drosophila hit | neither inactivation nor afterpotential E (3e-24) |
| Best Human hit | long-wave-sensitive opsin 1 (9e-38) |
| Best NR hit (blastp) | putative GPCR receptor, opsin family (AGAP002444-PA) [Anopheles gambiae str. PEST] (1e-105) |
| Best NR hit (blastx) | putative GPCR receptor, opsin family (AGAP002444-PA) [Anopheles gambiae str. PEST] (2e-102) |
| GeneOntology terms | GO:0007186 G-protein coupled receptor protein signaling pathway GO:0007601 visual perception GO:0016021 integral to membrane GO:0007602 phototransduction GO:0018298 protein-chromophore linkage GO:0004872 receptor activity GO:0050896 response to stimulus GO:0004930 G-protein coupled receptor activity GO:0009881 photoreceptor activity GO:0004871 signal transducer activity GO:0007165 signal transduction GO:0016020 membrane |
| InterPro families | IPR000276 GPCR, rhodopsin-like, 7TM IPR017452 GPCR, rhodopsin-like superfamily |
| Orthology group | MCL16682 |
Nucleotide sequence:
ATGCCTCGATGGGGATACGTCGTATCCGCCTTTGTTCTCTTCTTAATTGGCTTCTTCGGA
TTCTTCTTGAATCTCATGGTAATTCTCCTCATGTTTAAAGATCGACAGTTATGGACACCT
CTGAACATAATATTGTTCAACTTGGTGTGTTCAGACTTTTCCGTTTCCCTATTGGGAAAT
CCCTTGACCCTTATTTCCGCACTATTCCATCGTTGGATTTTCGGCCACACTATGTGTGTC
ATTTACGGGTTCTTCATGGCTTTACTTGGTATAACATCTATTACGACACTTACCGTGATA
TCGTTCGAGCGTTATCTCATGGTAACAAGACCTCTCAGCTCACGTCATCTTAGTTGTAAA
GGAGCGACTGTATCGGTGGTATTCATCTGGCTTTACTCACTCGCTCTCACAACCCCGCCA
TTATTGGGTTGGGGGAATTATGTCAATGAGGCTGCTAATATCAGCTGCTCAGTGAATTGG
CACGAACAATCGAGGAATACTCTCACGTACATCTTATTCCTGTTCGCGATGGGACAGATT
GTGCCGCTGGCTGTCATCACCTTCAGCTATGTCAACATTATCAGGACTATGAAGCGGAAT
TCTCAACGCCTGGGTCGTGTGAGCCGAGCAGAGGCGCGGGCCACAGCCATGGTGTTCATT
ATGATCATATCATTTACGGTCGCCTGGACTCCATATTCACTGTTTGCACTGATGGAGCAG
TTTGCGACCGAGGGAATTGTATCGCCGGGGGCGGGAGTTATACCAGCACTAGTAGCGAAA
AGTTCCATTTGTTACGATCCTTTAATTTACGTTGGGATGAACACACAGTTTCGAAAATCT
ATCAAAAGAATATTTGGAATACAAAAACGAAGGGGTTCTAGAATTGAAAAGTGCTATAAT
AACTCGATACTATCACCAACACATCGACGATCTGCTTACAATGATATTACCGTCCGTTAT
AATTCTTCAGACACAGTCATATCAACTCCGAAACGTTACTCTGATAAACGGATTTTCAGT
AGTGAAGATTCTGAAAGTCATATGGCATCCACAGTAACGAATGAATCGAGTCGTCCGACA
GGAAAAGTGTATGAATTATGCACTATCCAAGAGAACAAAACCGGATCGGATGCTGAGAGA
TCCGGAGACACTGTTTGCGATGATGATAACACAAGTAACAAAAACCTAGAACTTGTTTTT
GGTGAATCTTGTAAAATATTTAAAGACTCCAATGTTGATAACGAACGATCCACAACTGGT
GCAGTCAAAAACAAAATTCATATAACTGAAAGTAAGAACATTTTAGATGAAGCCGACTTG
CGTCTAATTGAAAGTAATTTAAATCAAAGTTCTAAAAGATCTAAAATAATAAGACACAGC
TATTCGTTGGATTTGGGAGGAGTTTCTAATGAAGGTACACGAAGAAAATTTTCTATTGAA
ACTAAACTAGAAACATTTAACCCTCCAAAACTATTCAGAAAAGATGGCGTAGTGAACAAA
CTCTTTGAATCGGATGATACAGATAATGTTAGTTATATATGTACAATAGATAATAGTGAA
AATCATGAGGAACACTTGTCGTCTAAGTAA
Protein sequence:
MPRWGYVVSAFVLFLIGFFGFFLNLMVILLMFKDRQLWTPLNIILFNLVCSDFSVSLLGN
PLTLISALFHRWIFGHTMCVIYGFFMALLGITSITTLTVISFERYLMVTRPLSSRHLSCK
GATVSVVFIWLYSLALTTPPLLGWGNYVNEAANISCSVNWHEQSRNTLTYILFLFAMGQI
VPLAVITFSYVNIIRTMKRNSQRLGRVSRAEARATAMVFIMIISFTVAWTPYSLFALMEQ
FATEGIVSPGAGVIPALVAKSSICYDPLIYVGMNTQFRKSIKRIFGIQKRRGSRIEKCYN
NSILSPTHRRSAYNDITVRYNSSDTVISTPKRYSDKRIFSSEDSESHMASTVTNESSRPT
GKVYELCTIQENKTGSDAERSGDTVCDDDNTSNKNLELVFGESCKIFKDSNVDNERSTTG
AVKNKIHITESKNILDEADLRLIESNLNQSSKRSKIIRHSYSLDLGGVSNEGTRRKFSIE
TKLETFNPPKLFRKDGVVNKLFESDDTDNVSYICTIDNSENHEEHLSSK