| New model in OGS2.0 | DPOGS205017 |
|---|---|
| Genomic Position | scaffold2670:- 10197-15219 |
| See gene structure | |
| CDS Length | 1674 |
| Paired RNAseq reads | 69 |
| Single RNAseq reads | 190 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001656 (5e-58) |
| Best Drosophila hit | CG12299 (9e-20) |
| Best Human hit | zinc finger protein 16 (2e-21) |
| Best NR hit (blastp) | PREDICTED: similar to Zinc finger protein 543 [Equus caballus] (1e-27) |
| Best NR hit (blastx) | PREDICTED: zinc finger protein 726 [Callithrix jacchus] (2e-33) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0005634 nucleus GO:0006350 transcription GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0003677 DNA binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process GO:0046872 metal ion binding |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type IPR022755 Zinc finger, double-stranded RNA binding |
| Orthology group | ND |
Nucleotide sequence:
ATGAAATTAAAAACAATATGCTGTGCATGTTTGAGTGTTGATAGAAAGCTTACGAAACTG
TGCCGAGTCGAGGATGGTGTAAATAGTTTATTCTTCCTACTTTCATACAACTGCGAAGTT
TTCGAAGAAATATTCAACAAGAGAGCATCGCTTTTATCAATATGTTGGGAGTGTAAGGCT
ATTATATATAGACTGCAACAGTTCCGCAAACAAGTAAGCCTCGCCCAGAAACAACTGTCC
GAGCTGACAGACGGAAGAGATCTCAAAAATTTCCACAGTCTATCAAAACTACAGTATTCC
CATCAGGATAAATACAATTTTATTATAGAAAATATATCAAAGCCAGATAATTTTATAGAC
TGTGGCCCTGACATCAGTTTCTTGAAGACTGAAAGTGACACAGATGATATACCGCTAGCA
GATTTATATTTAAATAATTGTAAAGATATACAACCTCCACCAAACGATATTAACATTGGC
TGTATAGAAAATAATACAGATAATAAACATGTTGGGTCTGGATGTTCCAAATATGAAATG
ACAGAAGAGGAAATGTGGGAGAGTATGAAAACACAGAAAGAAAATGAATTTTACATGAAC
AGTTCAAGCAAATGTGAATCTTGTGTTAGAGTTTTCAATGACTATAAATGTTTGGAGCGA
CACAACTTGAAATTACATGTACAGAGACCGAATCATATACAGTGCGGCATATGTAAAGTG
TACGTGAAACGAAGGGGTTTTAAACAGCACAAACAGAGTCACTACACAAAACATGTATGT
GATATCTGTCGGTTCGTTGCATACAAAATTGTCACAATGAATACACATCTGAGGAACGAG
CATGGTGTTGATGTTGAATACAAAAAGGTAAGAAGGAAACCAAATGAGTCTAAGACATCG
GACAAACAGACGGGGGGGTTTCTATGTACAGAGTGCGACAAATGGTTCGAGAACAAAAAC
AAAAGATACAAACACACACAGAAGTGTCACAGAGACGGCTTCAAGTGCGGCTCCTGCGGG
AAGAGGTTCGCCTTCAGGAACACGCTGACCAGGCACGAGAGGGTACATTCCTCGCCACTG
CCCAGGGAGCAGTGTCCCACGTGTGGGAAGCTCATCCGCCAGGACCTGATCAAAGCCCAC
GCTCACACACACACTCACAGACAGACCCATGTGTGTGTCGCGTGTGATAAACGCTTCATA
TCAAGGGCCTCGTACGAGAATCACCTCAAGTATGCCAAATCACACGCCGTTGGAGACGTC
TTGAAATACAAATGTCCTGAATGCAAGAAAGGATACAGATCCCGTGGCGAGTTACGAGAT
CACGTCAACTACCAACACATGGGCAGGACCCTGCACAAATGTCCTATATGCGACAAGGCC
CTAGCGACCCGCAGGTGCATAACCCGCCACGTCAAACGAGCGCATCACGGGATCAAAGAG
AACGACAAGGACAAGATATGTCAGACGTGCGGGAAGACATTCCGGGACAATAAGTGTCTC
CGGGAACACGAACTAATCCATACAGGCGAGAGACCGCTGTCCTGTGATGTTTGTGGTCGG
ACGTTCAGACAGAGCGCGTCATTATACACACACAGACGGAGGGTCCATCATATAGTGGCC
GCTCAGAGGATCGTCGTACACGAGGAAGGTTCGGAGAAATTGAAACCGGTCTAG
Protein sequence:
MKLKTICCACLSVDRKLTKLCRVEDGVNSLFFLLSYNCEVFEEIFNKRASLLSICWECKA
IIYRLQQFRKQVSLAQKQLSELTDGRDLKNFHSLSKLQYSHQDKYNFIIENISKPDNFID
CGPDISFLKTESDTDDIPLADLYLNNCKDIQPPPNDINIGCIENNTDNKHVGSGCSKYEM
TEEEMWESMKTQKENEFYMNSSSKCESCVRVFNDYKCLERHNLKLHVQRPNHIQCGICKV
YVKRRGFKQHKQSHYTKHVCDICRFVAYKIVTMNTHLRNEHGVDVEYKKVRRKPNESKTS
DKQTGGFLCTECDKWFENKNKRYKHTQKCHRDGFKCGSCGKRFAFRNTLTRHERVHSSPL
PREQCPTCGKLIRQDLIKAHAHTHTHRQTHVCVACDKRFISRASYENHLKYAKSHAVGDV
LKYKCPECKKGYRSRGELRDHVNYQHMGRTLHKCPICDKALATRRCITRHVKRAHHGIKE
NDKDKICQTCGKTFRDNKCLREHELIHTGERPLSCDVCGRTFRQSASLYTHRRRVHHIVA
AQRIVVHEEGSEKLKPV