New model in OGS2.0 | DPOGS200157  |
---|---|
Genomic Position | scaffold36301:- 1485-3729 |
See gene structure | |
CDS Length | 465 |
Paired RNAseq reads   | 31 |
Single RNAseq reads   | 237 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006045 (7e-19) |
Best Drosophila hit   | Rab-protein 5, isoform A (4e-18) |
Best Human hit | ras-related protein Rab-24 (3e-28) |
Best NR hit (blastp)   | PREDICTED: similar to Ras-related protein Rab-24 [Apis mellifera] (9e-35) |
Best NR hit (blastx)   | RAB24, member RAS oncogene family [Xenopus laevis] (1e-29) |
GeneOntology terms    | GO:0005515 protein binding GO:0005737 cytoplasm GO:0000166 nucleotide binding GO:0005739 mitochondrion GO:0005829 cytosol GO:0016020 membrane GO:0006914 autophagy GO:0015031 protein transport GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction |
InterPro families    | IPR001806 Ras GTPase IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR013753 Ras IPR020851 Small GTPase |
Orthology group | MCL17718 |
Nucleotide sequence:
ATGAGTAGATGCGACTTCAAAATTGTGTTGCTCGGCAGCGAGCATGTTGGAAAAACGAGC
TTGGTGTTGAGATTCGTTAATTGCAGGTTTAATTCTGGCACACCATATCAAAACACAATC
GGAGCTGCTTTCTGCGCTAAGACGATGCAATCCAACGGCAAAGATCTCAACATAGGCATA
TGGGATACGGCCGGTAGCGAACGCTACGAAGCCATGACTCGCATGTACTATAGAGGTGCA
CATGCGGCAATTATATGCTACGATCCATGCTGTGCGGCGTCCTGGGCTAGACTGAGACAT
TGGTTGGCTGAATTACGGACTGTGGAAGAGGTGGTGTTAACGTTAGTAGGTTTAGCTTAT
CTACCCTCGAAGTTGAAGCTTTGGGGCACTATACCTGGTACATCAGGCATGGATAGAGAG
TTGGATGATGAGAACGTCCAGATCCTGAGACAGATCACAAATTAA
Protein sequence:
MSRCDFKIVLLGSEHVGKTSLVLRFVNCRFNSGTPYQNTIGAAFCAKTMQSNGKDLNIGI
WDTAGSERYEAMTRMYYRGAHAAIICYDPCCAASWARLRHWLAELRTVEEVVLTLVGLAY
LPSKLKLWGTIPGTSGMDRELDDENVQILRQITN