| New model in OGS2.0 | DPOGS213331 |
|---|---|
| Genomic Position | scaffold1351:- 24505-29289 |
| See gene structure | |
| CDS Length | 1506 |
| Paired RNAseq reads | 176 |
| Single RNAseq reads | 453 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009461 (1e-164) |
| Best Drosophila hit | TNF-receptor-associated factor-like, isoform A (4e-36) |
| Best Human hit | TNF receptor-associated factor 3 isoform 2 (1e-13) |
| Best NR hit (blastp) | GJ18797 [Drosophila virilis] (2e-47) |
| Best NR hit (blastx) | GJ18797 [Drosophila virilis] (9e-48) |
| GeneOntology terms | GO:0007165 signal transduction GO:0006952 defense response |
| InterPro families | IPR013322 TRAF-type IPR008974 TRAF-like IPR002083 MATH |
| Orthology group | MCL18115 |
Nucleotide sequence:
ATGAGTATTAAAAGGATCGAAGCCGATGTGGATGATCGGGCCCGGGACAGCGCCTGCTAT
TTTTGTAATGAAATGTTCGAGATGGGAAAATTACAGAATCATTTGAAACAATGCGGTAGT
ATACTAGAGCAATGTCCGCTGCGATGTGGAGCGTGGATACAGAGGAAACACAAGGACACA
CACGTCAAGGACTGCCCGCAAATGGCAAGGAATCGAGAAGCTGTCTCTCCCAGTCATGTC
CGTGCCTCCGACCCGGTTCCTCCTCATGAAGGAACGCCCACCGTTCATACATGGACTCCA
CATTCAATACCCTTAGAGGACTGTGTCTCTTACCTTGAGAAGGAAATTACATCCATTAAG
TTGATTCTCACCGAGGAGTCCAGTCATCGTGATGTCCAGTCCACTGAGATAGACAACCTG
AGATCCAAGTTAGTGTTGGTCGAGGAACGAGCACAACACTTCCTCTCAACGTTGGTGTCC
TTAAGAGCCGCTGTTGATGATGAGGCTGAGAGATCAGCCAACTGGGCGGCACAGTTCAAA
CACGACCTCGCTAATGTCCAGCTTGCTTTACAGGAGTTACAAAGCCAGCAGATGAATACG
GCAATGCGTTTAGAGAGCGTCGTAAATAGTCTCGTACACGAGCAACGAGAGAGGGAGCTG
TTGGAACAGGCGATGACAGATCATGATAATAGGATAAGAAGCATCAAAGCATTGGAGGAA
GCGGTAAACTATCTAAAGCAGACCATAGAAGAAGAGAGGCAGCGCAATGAGGAAAATCAA
ATTGGATTAATGGGTGAGATGGTTGGGGGTCGTTTGGCAATAGATCGTTTAGCAGTTCTG
GAAGTAGCCAACGCAGATGCTAGGGCGGAAGCGTCAGAACAAACAGCTAAGATGGACTTG
GTCTCTAGAGATCTCAGGGCTTTAACGAAATCCTACCACAAGTTGAGAAACGAGCTCATA
GACTTCCAGTCAAAGGTCAGCTTGGACAATCCGGAGCTCGGTGGAGACAATGGTCATCTT
ATCTGGCGAATAGATAACTTCCAGGCCCGAATGAAAGAAGCCAAGGAAAAAGACTCCGTA
TTGACAAGTCCTCTCTTCCGTACCAGCAAATACGGTTACACATTAAAGGCTGAATTAAAT
TTGAACGGTATCGGTAAATGGAAAGGACGACATCTGACGTGCACGCTACGCCTTGTGGCC
GGCCCGTACGACCAACTTCTGGACTGGCCCTGCGATCTCACAATCAACATCGTCTTGAAG
GATCAGCCCGCCAAAAGAAGTCAGGCAACGGATGTTGTTAAAACTCTGGATTTGCGTCGT
AAATCGTCTTCAAAGCGGCACGACTACGACATCTCCGGCGACGACAAGACCAGATCGACA
GAATCCCTCGACCTTAACGTCATACAGATGAAGAAACAGTACATCTTCATACCTCACACC
AGTCTCGATAAATTTGAATACATCAAAAATGATGTAATGTTCTTGGAATTTATAGTAAAC
CAATAG
Protein sequence:
MSIKRIEADVDDRARDSACYFCNEMFEMGKLQNHLKQCGSILEQCPLRCGAWIQRKHKDT
HVKDCPQMARNREAVSPSHVRASDPVPPHEGTPTVHTWTPHSIPLEDCVSYLEKEITSIK
LILTEESSHRDVQSTEIDNLRSKLVLVEERAQHFLSTLVSLRAAVDDEAERSANWAAQFK
HDLANVQLALQELQSQQMNTAMRLESVVNSLVHEQRERELLEQAMTDHDNRIRSIKALEE
AVNYLKQTIEEERQRNEENQIGLMGEMVGGRLAIDRLAVLEVANADARAEASEQTAKMDL
VSRDLRALTKSYHKLRNELIDFQSKVSLDNPELGGDNGHLIWRIDNFQARMKEAKEKDSV
LTSPLFRTSKYGYTLKAELNLNGIGKWKGRHLTCTLRLVAGPYDQLLDWPCDLTINIVLK
DQPAKRSQATDVVKTLDLRRKSSSKRHDYDISGDDKTRSTESLDLNVIQMKKQYIFIPHT
SLDKFEYIKNDVMFLEFIVNQ