| New model in OGS2.0 | DPOGS213317 |
|---|---|
| Genomic Position | scaffold1351:+ 15993-23090 |
| See gene structure | |
| CDS Length | 1818 |
| Paired RNAseq reads | 446 |
| Single RNAseq reads | 1100 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009500 (3e-169) |
| Best Drosophila hit | CG5111 (1e-64) |
| Best Human hit | NEDD8 ultimate buster 1 (7e-66) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC007685 [Tribolium castaneum] (7e-119) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC007685 [Tribolium castaneum] (4e-103) |
| GeneOntology terms | GO:0005634 nucleus GO:0034341 response to interferon-gamma GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0006511 ubiquitin-dependent protein catabolic process GO:0005515 protein binding GO:0034612 response to tumor necrosis factor GO:0016567 protein ubiquitination |
| InterPro families | IPR009060 UBA-like IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal IPR019955 Ubiquitin supergroup |
| Orthology group | MCL16918 |
Nucleotide sequence:
ATGGAAACAAGTCTCGAGTATGAAGATTTGTTGATTAAATTAAGAGCCAAACTCAATGAA
AACAAGATCAAATTGTGGGAACCGCCTTACATTTCGGAAACTGAGGAGTACTCCCAGAGC
CTTAAGGATCTCTCTAAAAAATATTCTGAAGAACTTAAACATGATGAAAATATAATAATC
CAAGCTCTTTTTGAACTCCAACTGCATTCAATAGAAAGGTCAAAAGCTAATAATGAGTTT
AAGCAGACTGGTTACGCCACACTCAGGGTGAAAGCCACAGTACAGGGAGAAAAACCTAGA
ATGTTGAAGATCATGAAACAGCTAGATGTTTCAGGTGATGAATTGATTGAAGCCGTCGCA
AACTTGCTGGAGGTTGCTAAAAATAGAGTCAAACTTATATACAATGGTAAATTAATAAGA
CAGAGTTCAAATCTTGAAGAACAAGGCATCAAAAACGGTGTACAGATAATGGCACTGGTT
ATGGCTGAAGCTCCAGAGCAGATTAAGAAAGAGGATAAAATTTATCGTGAGATGAAATCC
ACATTAGATGATGCTACATTACTGTCGGAGTATGTGGACGATATCGCTGATGATGAAGAG
TACATGAAGCTGGAAGATCAATCTGGTAAGGCAATTAAGCTGCCGCCAGCTGAGCGTAGG
TCCTTACTGATAGGGCTGGCGTTACACGAGCGAGGACGAGCCGCAGCTAGGAAGCAGGAC
TATTCGCTGGCGTTGGTGCTATTCCTTGAGGCTGATAGACAGTTCAGTGAATGCAGATCT
TCGATCCTACAGACTGTCGACAACATCGCTGTGTTGCAACTGGACATATCCTGGTGTTAT
CTTTGTCTTCGGAGTCTTGCTTCGGCCGGTGACGCGGCCGCTCGTCTGGCCCGCGCCGAA
AACGCGTTCAGGCTTTCGTATGGCGAGGATCATCAGCGATTGATCGCTCTCAAAGGAACC
AATGCAAATGAGAGAGTGCTTTTCATGCGGCTCTACCTGCTGCAAGGGATTGTGGCGTAT
CATCAAAACAAACGTGACGAGGCCAGGGTTCTGCTGGAGAAAGCTGAGAACGAACTCAGA
TATATTAAGGTTGACGAAGCCTCAGTAGAAGCATTAACAGAGCTAGGCTGGTCACGCGGT
CAGGCTCGGACAGGTCTACGAGCGGCTGGAGGTGACCTGGACCGAGCACATCACTACCTG
GAGGAAAAACGAGCGGAGAGAGAGACGGAAAGAGAAAAACATCGAGCGGAAAGACTCCAG
GCGCAACTTGGTACATGTCTGGATGGCTCGTCCGTGAATCCCCAACTAGTTCAAGCGCTA
CAAGGCATGGGCTACACGAGGCGGATGGCGCTGCTGGCTCTAAGGAACTCTAACAACAGT
GTAGCCGATGCTGTGAGGCTCATACAGGAACACCCTGAGATGTTAGTGGAGAGTGACTCG
GACGACGCCACTCCCAGTTCGGACGATTCACTGCCGGAGCCGGACAACAAGCTGATCGCT
GAGTTGGAATCAATGGGCTATCCTGTATCTGAGGCCCGCAGCGCTCTCCGCCTGTCCAGG
AACAACGTGTCACGGGCTGTGGAAATACTGCACCAAGGATGTGAACACTCGTGTGAACCA
GGCTCATCGAACCCGTCAACGAGCGCCGGAGTCACACGAAAGAAGCAAAAGAAGGCATCG
AAATTAAAAAAGAAGAAAGACCGAGAGAGTGCCCTACACCGCCTGCAAAATACAATACGC
TCCGAGGACGACGAGTACCTCAGCGGAGCCCTGAACGAGGAAGAAGCGATGTTAGGAACT
TACCGTGCACTTCTGTAA
Protein sequence:
METSLEYEDLLIKLRAKLNENKIKLWEPPYISETEEYSQSLKDLSKKYSEELKHDENIII
QALFELQLHSIERSKANNEFKQTGYATLRVKATVQGEKPRMLKIMKQLDVSGDELIEAVA
NLLEVAKNRVKLIYNGKLIRQSSNLEEQGIKNGVQIMALVMAEAPEQIKKEDKIYREMKS
TLDDATLLSEYVDDIADDEEYMKLEDQSGKAIKLPPAERRSLLIGLALHERGRAAARKQD
YSLALVLFLEADRQFSECRSSILQTVDNIAVLQLDISWCYLCLRSLASAGDAAARLARAE
NAFRLSYGEDHQRLIALKGTNANERVLFMRLYLLQGIVAYHQNKRDEARVLLEKAENELR
YIKVDEASVEALTELGWSRGQARTGLRAAGGDLDRAHHYLEEKRAERETEREKHRAERLQ
AQLGTCLDGSSVNPQLVQALQGMGYTRRMALLALRNSNNSVADAVRLIQEHPEMLVESDS
DDATPSSDDSLPEPDNKLIAELESMGYPVSEARSALRLSRNNVSRAVEILHQGCEHSCEP
GSSNPSTSAGVTRKKQKKASKLKKKKDRESALHRLQNTIRSEDDEYLSGALNEEEAMLGT
YRALL