| New model in OGS2.0 | DPOGS204303 |
|---|---|
| Genomic Position | scaffold777:- 26692-33137 |
| See gene structure | |
| CDS Length | 1740 |
| Paired RNAseq reads | 464 |
| Single RNAseq reads | 1557 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007579 (0.0) |
| Best Drosophila hit | TBP-associated factor 6 (4e-155) |
| Best Human hit | transcription initiation factor TFIID subunit 6 isoform epsilon (2e-122) |
| Best NR hit (blastp) | transcription initiation factor TFIID subunit 6 [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | transcription initiation factor TFIID subunit 6 [Culex quinquefasciatus] (4e-174) |
| GeneOntology terms | GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0016251 general RNA polymerase II transcription factor activity GO:0005669 transcription factor TFIID complex GO:0006367 transcription initiation from RNA polymerase II promoter GO:0051090 regulation of transcription factor activity GO:0016986 transcription initiation factor activity GO:0003677 DNA binding |
| InterPro families | IPR011442 Domain of unknown function DUF1546 |
| Orthology group | MCL14342 |
Nucleotide sequence:
ATGCATCATTCAAAAAGACAAAAACTTTCTATTACAGATATAGACAATGCTTTAAAAATA
AAAAACACTGAAGCCCAGTATGGTTTTGTGCAGCCTGACTCATTGCCATTCAGGTTTGCA
TCTGGTGGTGGTAGAGAGCTACATTTTATAGAGGAGAAAGAAATTGATTTATCAGAAATA
CTGTCAGCTCCACCCCCAAAAATTCCTCTTGATGTGTCCTTGAGAGCACACTGGCTTAGT
GTTGATGGGGTTCAGCCAACTGTTCCCGAGAATCCGCCACCATTATCCAAAGAGGCACAA
AAATTGGAGTCAGTTGATCCTGTTTCTAAATTAAGCAAGCCTGCCAATAAAGATTCAGCA
GGAAAACCAGTTAGTGGTAAAGCAGCTAGACTTAAAGCCTCAGAGTCTGTCCATGTTAAA
CAACTTGCAACACACGAGCTTAGTGTGGAACAACAGCTATATTATAAGGAAATCACAGAA
GCAGGTGTGGGCAGTGATGAGGGACGGAGAGCTGAAGCCCTGCAATCACTGGCATGTGAT
CCTGGCCTACATGAGATGTTGCCAAGGATGTGTACATTTATATCAGAGGGTGTAAAAGTC
AATGTTGTCCAGAATAACTTGGCTCTCCTTATTTATTTGATGAGAATGGTGAAAGCAATG
TTGGACAATCAATCACTTTATTTAGAAAAATATCTTCATGAATTGATTCCATCAGTCTCA
ACGTGTATAGTGTCCCGACAGCTTTGTACGCGGCCAGAAGTTGACAACCACTGGGCGCTC
CGAGACTTCGCCGCTCGACTAATGGCCCAGCTGTGCAAAACATTTAATACTTCTACTAAT
AATCTACAAACAAGAGTTACAAGGTTGTTTGCAAAAGCCCTGCAATGTCCATCACAAACA
AACAACGAAAGTGGACCGTCAATGGTTGCTTCTATGAAGGAATCTGAGAAGACTCCTTTA
GCCTCGCTCTATGGAGCAGTCCAAGGTTTAGCTGAGTTGGGTCCTGAGGTGGTGAAGGTA
TTTATCCTGCCTCGTGTGCGATGGTTAGGCGAGCGTGTGGAGGGTGCGCTAGGTGGGGCT
GCGGGCGCAGACCGTGTAGCTGCGAGCAACCTTAAACACCAGTTACTCAAGGTGTTGGCT
CCAGTAGTGCGACAGCTTCGTCAACCGCCCGACCTTCCTGATGACTACAAACGCGAGTAC
GGCTACCTCGGTCCGAGTCTACAGCAAGCTGTGAGTAAGCTGCGGTCGTCTCCGACAGGC
GGCGGCGGCGGCGGCGCGGTGGCCGTGTTGCCGTGTACCCCGCCTCTGCTACCTCACCCG
CCATCACCCGCACCACACGCCAAGTCCATCGGCGCCCCCTCCCCCGCGCCCTCAACACCT
CCGCCGCAGAAATTCGTCATAGTAGCCTCGCAACAGAAGACGCAACAGAACCAACCAGCC
AGTGGGTCCGGTCACATAGTAGTTCATAGCTCGCAGCCTACCATCGTCCGCAGTCAAAAT
GTACAGTCGGTGGTGGTGACGAGCGGGCCGGCGGGAGCACAGCCGCCGCAGAAGCTGGTG
GTGGTGGGGATGAACCCCCTGCACACAGCACACTCGCAACACTCACCGCTGCAGGCCACC
ACCACGGTGTCGGGCGTCAGTCAGGCGCCCGTGTCAGTGGTCGCCAAGCCGGTGTTCGCT
CGCGGCGGCTCGGCCCCGCAGCCTCCGCCGGAGCTGGACGACCTGTCGCACCTCGCTTGA
Protein sequence:
MHHSKRQKLSITDIDNALKIKNTEAQYGFVQPDSLPFRFASGGGRELHFIEEKEIDLSEI
LSAPPPKIPLDVSLRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPVSKLSKPANKDSA
GKPVSGKAARLKASESVHVKQLATHELSVEQQLYYKEITEAGVGSDEGRRAEALQSLACD
PGLHEMLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKAMLDNQSLYLEKYLHELIPSVS
TCIVSRQLCTRPEVDNHWALRDFAARLMAQLCKTFNTSTNNLQTRVTRLFAKALQCPSQT
NNESGPSMVASMKESEKTPLASLYGAVQGLAELGPEVVKVFILPRVRWLGERVEGALGGA
AGADRVAASNLKHQLLKVLAPVVRQLRQPPDLPDDYKREYGYLGPSLQQAVSKLRSSPTG
GGGGGAVAVLPCTPPLLPHPPSPAPHAKSIGAPSPAPSTPPPQKFVIVASQQKTQQNQPA
SGSGHIVVHSSQPTIVRSQNVQSVVVTSGPAGAQPPQKLVVVGMNPLHTAHSQHSPLQAT
TTVSGVSQAPVSVVAKPVFARGGSAPQPPPELDDLSHLA