DPGLEAN22294 in OGS1.0

New model in OGS2.0DPOGS204239 
Genomic Positionscaffold777:+ 81102-84996
See gene structure
CDS Length1806
Paired RNAseq reads  5555
Single RNAseq reads  14179
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA007516 (0.0)
Best Drosophila hit  elongation factor 1alpha100E, isoform C (0.0)
Best Human hitelongation factor 1-alpha 1 (0.0)
Best NR hit (blastp)  PREDICTED: similar to putative elongation factor 1-alpha isoform 1 [Tribolium castaneum] (0.0)
Best NR hit (blastx)  GJ23103 [Drosophila virilis] (0.0)
GeneOntology terms






  
GO:0006414 translational elongation
GO:0003746 translation elongation factor activity
GO:0005737 cytoplasm
GO:0005853 eukaryotic translation elongation factor 1 complex
GO:0006412 translation
GO:0003924 GTPase activity
GO:0005525 GTP binding
GO:0005811 lipid particle
InterPro families




  
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
IPR000795 Protein synthesis factor, GTP-binding
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
IPR004539 Translation elongation factor EF1A, eukaryotic/archaeal
Orthology groupMCL10264

Nucleotide sequence:

ATGGGCAAGGAAAAGACGCACATCAACATCGTTGTGATCGGTCACGTGGACTCCGGCAAG
TCCACTACTACCGGCCATCTGATTTATAAGTGTGGTGGAATCGATAAGCGTACTATCGAG
AAGTTTGAGAAGGAGGCGCAGGAGATGGGCAAGGGCTCGTTCAAGTACGCCTGGGTGCTG
GACAAGCTAAAGGCGGAGCGCGAACGTGGTATCACCATTGATATTGCCTTGTGGAAGTTC
GAGACTGCCAAGTACTACGTTACCATCATCGACGCCCCTGGCCATAGAGACTTCATCAAG
AACATGATCACTGGAACCTCGCAGGCGGACTGCGCCGTGCTGATAGTTGCGGCTGGTACG
GGTGAGTTCGAGGCCGGCATCAGTAAGAACGGTCAGACCCGCGAGCACGCGCTGTTAGCT
TTTACCCTGGGGGTGAAGCAACTGATCGTGGGCGTCAACAAGATGGACTCCACCGAGCCG
CCGTACCATGAGGCGAGATACGAGGAGATCAAGAAGGAAGTGTCCTCTTACATCAAGAAG
ATCGGGTACAACCCGGCGACCGTGGCGTTCGTGCCCATCTCGGGCTGGCACGGAGATAAC
ATGTTGGAGCCTTCGGACAAGATGCCCTGGTTCAAGGGGTGGACCATTGACCGCAAGGAC
GGGAAAGTGGAGGGCAAGTGCCTCATTGAGGCCCTGGACGCTATCCAGCCTCCGTCTCGT
CCCACCGAGAAGCCGCTGCGTCTTCCTCTGCAGGACGTGTACAAGATCGGAGGCATCGGG
ACAGTGCCCGTAGGACGAGTCGAGACCGGCATCCTGAAACCCGGCATGGTGGTTGTGTTC
GCGCCCGCGGCCATCACCACCGAGGTGAAGTCTGTGGAGATGCACCACGAGGCCTTGCAG
GAGGCGATGCCTGGAGACAACGTGGGCTTCAACGTGAAGAACGTGTCGGTGAAGGAGTTG
CGTCGCGGCTACGTGGCCGGTGACTCCAAGAACTGCCCGCCCAAGGGTGCTTCGGACTTC
ACCGCCCAGGTGATCGTGTTGAACCACCCGGGGCAGATCAGCAACGGCTATACCCCGGTG
CTGGACTGTCACACCGCTCACATCGCCTGCAAGTTCGCTGAGATCAAGGAGAAGTGCGAC
CGTCGTACTGGCAAGACGACCGAGGTGGAGCCGAAGTCCATCAAGTCCGGCGACGCGGCC
ATCGTCACCCTAGTGCCGACCAAGGCGCTGTGTGTGGAGTCGTTCCAGGAGTTCCCGCCG
CTGGGACGCTTCGCCGTCCGGGACATGCGTCAGACGGTTGCCGTTGGAGTCATCAAGGTA
CCCCAGCGTGTATACCCCCGGTCTCCCCCGCGGCCTCCCAGCCCGATCGCCTACGGCGTC
CCCATTCCCAACGTAGAGTCAGTGTCCCCCCCCAATCGGAGCTTCTTCGCTGGTGACATC
GACCCCGGACCCACCTCGTGCATTTATCTCAACAAGATACTCAAGTTTTTTCGTCTTAGT
TACGTTTACTTTATAGGTTTATGTCTTTGTGATTATTTTAGAGGTAAGTTACTGGAGAAG
TTTGAGTTGCCGTACTTGTTGTCGCGGTTCGTTTTATTTTTCCATCGCAAGGAGTTCAGG
AGGAAAGACGACGGCGGCGAATTTAAAATTGAACTTTTAAGCCTTTTAGAAGTTTTGTTG
TATGAGACTCTGCTCCTGTACGCCATCATAACTAAATTGCTTAAGATCGTACTGAACATC
TCGTCCTTGTTTCTGTTAGATTGGTCGGTGAGTTTTTTATGTAATTTAGTTATGTCTAAT
TTCTAA

Protein sequence:

MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK
IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPSR
PTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEALQ
EAMPGDNVGFNVKNVSVKELRRGYVAGDSKNCPPKGASDFTAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFAEIKEKCDRRTGKTTEVEPKSIKSGDAAIVTLVPTKALCVESFQEFPP
LGRFAVRDMRQTVAVGVIKVPQRVYPRSPPRPPSPIAYGVPIPNVESVSPPNRSFFAGDI
DPGPTSCIYLNKILKFFRLSYVYFIGLCLCDYFRGKLLEKFELPYLLSRFVLFFHRKEFR
RKDDGGEFKIELLSLLEVLLYETLLLYAIITKLLKIVLNISSLFLLDWSVSFLCNLVMSN
F