| New model in OGS2.0 | DPOGS213111 |
|---|---|
| Genomic Position | scaffold679:- 74194-80874 |
| See gene structure | |
| CDS Length | 2790 |
| Paired RNAseq reads | 736 |
| Single RNAseq reads | 1910 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007870 (4e-100) |
| Best Drosophila hit | CG8611, isoform B (3e-72) |
| Best Human hit | probable ATP-dependent RNA helicase DDX31 isoform 1 (5e-68) |
| Best NR hit (blastp) | PREDICTED: similar to CG8611-PB [Nasonia vitripennis] (9e-89) |
| Best NR hit (blastx) | PREDICTED: similar to CG8611-PB [Nasonia vitripennis] (9e-82) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity GO:0004386 helicase activity GO:0016787 hydrolase activity GO:0000166 nucleotide binding |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR014014 RNA helicase, DEAD-box type, Q motif |
| Orthology group | MCL13272 |
Nucleotide sequence:
ATGGATGATATGCAATTGAATATTACTGTTGCGAAAAAGAATCAGAATAAACCAGTCAAT
AAAAAATTCGTTCAAAAAAATAACACTGAGTACAAGTTCAAGTCTAAGCCAGATTTTTCT
GGTAAAATTATCGCTCGAAAAAGACCTCAAAATACGGGTCAAAAAAAGTTACCGCAACAA
ATTGAAGAGGAACCACAGAATAAGATACGTAAGATACATACAAATACTAATTCAGACTCT
AAAAGCGACGATTTAGCTGGAAGGTTACGAGATCTCAGTGAAAACAAGGGTAAATTCCAT
GGAAAAGATTATCAGCTTCTAAGTGACGACATAAAACTCAAGCAGAAACTTAAAAGTGGT
CCATGGATATCATCACTGTTTAAGAATAACCCCGAAGTCCCTAAGATAGGCCAAAAAGCA
GTGAGACCGGTGGTGGAGAAAGTGTTTGCCGGCAAAACATTTTCAGATCTAAATATACAT
CCTCACAGTGTTGCTAATTTGAAACAAAATTTAAATTTGACCGAGTTGATGACAGTTCAA
CAAAAAGCTATACCAATTATTTTAGAGGGACGGGATGTTTTGATTAGATCACAAACAGGT
TCAGGTAAGACTTTGGCATATGCCTTGCCTGTCATTGAAGGTTTACAGGCGATAAGACCC
AAAATAAACAGGCATGATGGCATCAAAGCTATTGTAGTGGTTCCTACAAGAGAATTAGCT
GTACAAACATACGAGTTGTTTGTAAAACTTGTCAAGCCATTCGTTTGGATTGTACCAGGA
TTACTAAGTGGTGGCCAAAAAAGGAAAGCTGAGAAGGCTAGATTAAGAAAAGGCCTCAGT
ATTTTAGTTGGTACACCAGGAAGGATAAATGATCATTTAAGACACACACATTCATTGAAT
TTTGCGAAAACAGGATGCCTTATATTGGACGAAGCTGATCGCTTGTTAGATATGGGCTAT
GAGAAAGATGTATCCGCAATTGTCAAAGCTATAGAGGATCACAAAAAGGCGGCTACATAC
GATCCCATGGCGTTAGTTAAGCAAACAATTGTAAAGAAAGTTAGTGATAATGAAGAAGTT
GAAGAACAGAATGAAACAGAAAATGTTGTTGAAACGAGTGTAGAACATCCTTTAACTAAA
GTTTTTCTGTCTAAAGAGAGACAGACAATACTTTTGTCTGCTACACTGACAAAGGCTGTT
GAAAATTTGGCAGGAATAACTATGCAGGATCCTGTGTTTATAGATACATCAGATGGTAAG
GCTGTTGTTGCCGATTCCTTGAAACCTAAACCAGTCCAGGAAGAGCCTAACCAAAATTTA
CCTGAAGATGTGAATAATGTCAAAGAAACCAGCGAACATAATACTAAAGACCAAGCAAGA
CGAAATGACCAATCATGTGATTCAAGTAGAACTGGCCTGAAACCCTTTAGTGGAACCAAT
CATCCAGAACTATTCGGTGAAAACAAAAATGAAACCGAGAAAATTACAAACAAACCTAAT
GTAAAAAAAACAAGTAATGATGACAGTGACAGTGATTCTGATTACGAATACTTTAAAGTC
CAAAAATCTTTGGAGAAGAAACCCGATGAAACCAAAACAGAAGAAAAGTCTGAAGTAACA
GAACAAGAAGAAACTAGTAATGTTTTCGTAGATGCATTAAAAACAGCGATCGTTGAGGAC
GAATTAGTTTTACCGGCAACCGTAAATCAAACTTTCCTCATCGTGCCGATGAAACTGAGA
CTGGTAACACTGTGCTCGCTTATAGTTGAACATTGTGTTCTAAACAAAAAGGGCGGGAAA
ATGATCGTGTTTATGGCAACCCTAGAAATGGTGGATTATTTGTCGGAATTGATAGAGACT
GTTCTAACTGGAAAAGACAATAAGAAAACAGATTCTAAGAAAAAGGGATCACAAAATGGC
GGAAAAAATGATGAGGAATCTGATAGTTCCGATTTCGAAATAAACTACTCAGAGCCAGGG
CTGGTGCCTCTAGATCTGGATGTGTTCAGTTTGCATGGGTCGATGCCACATGAAACCAGG
ATGGAGGTGTTCAAGCAATTCCGTACGGCAAAACATGGCGTTCTCATATGTACTGATGTA
GCAGCTCGAGGTCTGGACGTACCTCGCGTTGATTTAGTGTTACAATTCTGTGCACCTGCC
TCGGCTACGGATTATGTTCACAGGGTTGGAAGAACCGGGCGTGCGGCTCAAGTCGGCGCC
GCTACAATGTTCCTTCTCCCCAGCGAGGCTGAGTTCGTCAGACATCTTGAACAGAAACGT
ATCAGGTTACGTCAATCGGATGAATCGAAGGCTCTAGAAGCGTTACGGACAGTGGCTCCC
TCGGAGCACTCGATGCAAAGGGCGGCTATTGCGGTTCAAGCGAAGCTGGAACACGTAGCT
CACAGCTCCAAGGAATGGCTCGCGAGAGCCAGTAGAGCGTTCACTTCCTGGGTGCGTTTC
TACTCTGGTTATCCCCGCGAGGTCAGGATGTGGCTGGACGCTCGTCAGTTGCACTTGGGT
CACGCCGCAAAGGCTTTCGCTCTGAGGGACACGCCCGCCGCCCTCGCGAGACGAGCCAAG
GCTGACCCAAGAGTCAAGGTCAAGCCTAATAACCGACTCACAGTACACGATGAGGAGGAG
AAGAAACGACCTGGATTCGAGAAATTGAAAATGGGTGCTTTCGGTAATAAAATACTCAAC
AAACAGACCTCCATGCACACGGCCAGCGAATACGACAGCGGTCTACCCCCAGTCGATACA
TACAGTTACAAGAAAAAGAAGAAACAGTGA
Protein sequence:
MDDMQLNITVAKKNQNKPVNKKFVQKNNTEYKFKSKPDFSGKIIARKRPQNTGQKKLPQQ
IEEEPQNKIRKIHTNTNSDSKSDDLAGRLRDLSENKGKFHGKDYQLLSDDIKLKQKLKSG
PWISSLFKNNPEVPKIGQKAVRPVVEKVFAGKTFSDLNIHPHSVANLKQNLNLTELMTVQ
QKAIPIILEGRDVLIRSQTGSGKTLAYALPVIEGLQAIRPKINRHDGIKAIVVVPTRELA
VQTYELFVKLVKPFVWIVPGLLSGGQKRKAEKARLRKGLSILVGTPGRINDHLRHTHSLN
FAKTGCLILDEADRLLDMGYEKDVSAIVKAIEDHKKAATYDPMALVKQTIVKKVSDNEEV
EEQNETENVVETSVEHPLTKVFLSKERQTILLSATLTKAVENLAGITMQDPVFIDTSDGK
AVVADSLKPKPVQEEPNQNLPEDVNNVKETSEHNTKDQARRNDQSCDSSRTGLKPFSGTN
HPELFGENKNETEKITNKPNVKKTSNDDSDSDSDYEYFKVQKSLEKKPDETKTEEKSEVT
EQEETSNVFVDALKTAIVEDELVLPATVNQTFLIVPMKLRLVTLCSLIVEHCVLNKKGGK
MIVFMATLEMVDYLSELIETVLTGKDNKKTDSKKKGSQNGGKNDEESDSSDFEINYSEPG
LVPLDLDVFSLHGSMPHETRMEVFKQFRTAKHGVLICTDVAARGLDVPRVDLVLQFCAPA
SATDYVHRVGRTGRAAQVGAATMFLLPSEAEFVRHLEQKRIRLRQSDESKALEALRTVAP
SEHSMQRAAIAVQAKLEHVAHSSKEWLARASRAFTSWVRFYSGYPREVRMWLDARQLHLG
HAAKAFALRDTPAALARRAKADPRVKVKPNNRLTVHDEEEKKRPGFEKLKMGAFGNKILN
KQTSMHTASEYDSGLPPVDTYSYKKKKKQ