| New model in OGS2.0 | DPOGS200777 |
|---|---|
| Genomic Position | scaffold1325:+ 3652-4599 |
| See gene structure | |
| CDS Length | 948 |
| Paired RNAseq reads | 305 |
| Single RNAseq reads | 894 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012123 (2e-120) |
| Best Drosophila hit | CG1753, isoform B (3e-26) |
| Best Human hit | cystathionine beta-synthase (4e-29) |
| Best NR hit (blastp) | pyridoxal-5'-phosphate-dependent protein beta subunit [Methylobacterium radiotolerans JCM 2831] (3e-87) |
| Best NR hit (blastx) | pyridoxal-5'-phosphate-dependent protein beta subunit [Methylobacterium radiotolerans JCM 2831] (4e-81) |
| GeneOntology terms | GO:0005829 cytosol GO:0046686 response to cadmium ion GO:0004124 cysteine synthase activity GO:0006535 cysteine biosynthetic process from serine GO:0007568 aging GO:0005634 nucleus GO:0005886 plasma membrane GO:0016020 membrane GO:0005777 peroxisome GO:0009507 chloroplast GO:0019344 cysteine biosynthetic process GO:0048046 apoplast GO:0005515 protein binding |
| InterPro families | IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit IPR001216 Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site |
| Orthology group | MCL22739 |
Nucleotide sequence:
ATGTCTCAGACAAGTGGGAGCACGGACATCAAAGCATCGGCCTTAGAGCTGATCGGCAAC
ACTCCACTCGTAGCGCTGGACAGGCTCTGGCCTGGACCTGGAAGGATCCTGGCCAAATGT
GAGTTTATGAATCCTGGAGCGTCCATCAAATGCCGGTCCTCGCTTTACATGATCACTAAG
GCCTTGGAGTCTGGAGCTTTGAAGCCGGGGGAACCGGTCCTGGAAATCACCTCCGGGAAT
CAGGGATGTGGTCTGGCGGTGGTGTGCGCGGTGCTGGGACATCCTTTGACCGTGACCATG
TCTGCTGGGAACAGCGTGCAGAGAGCGATACACATGGAGGCTCTGGGAGCCAGGTGTGTG
AGGGTTCCGCAGGTGGATGGCACATACGGCAAAGTCACATTGGCGGATGTGACCGCAGCT
GAGGAGAAAGGTTTGCAATTGGTGGAAGAGACTGGCGCGTACTACGTCAACCAGTTCAAC
AATGATATGAACTCTCGAGCTCATTACGAAACAACGGGCCCAGAGATCTGGAGACAGACT
GGCCAGCGAGTCGACGCGTTCGTCGCCGCAGTCGGCACAGCAGGAACCTTCGCTGGGACC
TCCAGATATCTCAAGGAAAAGGATCCGAGTATTGTTTGTGTGGTCGTGGAACCAGAAGGC
TCTGAGGCCATCAAAGGCTGCGAAGTAACGAAGCCAATGCATTTAATGCAGGGCTCGGGT
TACGGATGTGTTCCAAATTTGTTCAACTATGAACACCTGGACGACACCATAAGCGTCAGT
GACGAGGAAGTCCTGGAATACAAGAGGCTGATCGGAGAAAAAGAAGGTCTGTTCGTGGGC
TACACGAGTGCAGCAAATGTCCTGGCTGCGGCGAAGCTGCTGAAGGCTGGAAAGTTGAAG
GAGGACGCCTGGGTGGTGACCGTGCTCTGTGACACAGGCCTGAAGTAA
Protein sequence:
MSQTSGSTDIKASALELIGNTPLVALDRLWPGPGRILAKCEFMNPGASIKCRSSLYMITK
ALESGALKPGEPVLEITSGNQGCGLAVVCAVLGHPLTVTMSAGNSVQRAIHMEALGARCV
RVPQVDGTYGKVTLADVTAAEEKGLQLVEETGAYYVNQFNNDMNSRAHYETTGPEIWRQT
GQRVDAFVAAVGTAGTFAGTSRYLKEKDPSIVCVVVEPEGSEAIKGCEVTKPMHLMQGSG
YGCVPNLFNYEHLDDTISVSDEEVLEYKRLIGEKEGLFVGYTSAANVLAAAKLLKAGKLK
EDAWVVTVLCDTGLK