| New model in OGS2.0 | DPOGS212276 |
|---|---|
| Genomic Position | scaffold187:+ 34434-43038 |
| See gene structure | |
| CDS Length | 1917 |
| Paired RNAseq reads | 434 |
| Single RNAseq reads | 1360 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011437 (3e-119) |
| Best Drosophila hit | CG8273 (6e-61) |
| Best Human hit | protein SON isoform F (6e-47) |
| Best NR hit (blastp) | PREDICTED: similar to CG8273-PA [Apis mellifera] (2e-102) |
| Best NR hit (blastx) | PREDICTED: similar to CG8273-PA [Apis mellifera] (8e-92) |
| GeneOntology terms | GO:0003725 double-stranded RNA binding GO:0005622 intracellular |
| InterPro families | IPR014720 Double-stranded RNA-binding-like IPR000467 D111/G-patch IPR001159 Double-stranded RNA-binding |
| Orthology group | MCL14526 |
Nucleotide sequence:
ATGCCGGAATCTCCGATCGATAAGCTTAAATCAGATCTCAGGTCGAAACTAGATAAAAAA
CAAGAAAGTGTAACAGACAATGACAAAACAAAAAGTAAAATACAAATTAAGAATCTGAAA
TTTAGTACAGTTTTCGAAGAGACTGTGAAAAAGGCTGAAGAAGAAGCTAAGAAGAAAAAA
GAGAAGTTGGAAGAGGGGGAATATACAGATTCCTCAAGTAGTTCAGACGGGGATGAAGTA
TCTAACTCACAGTTCCCGAAGTCATCAGATCTAGTCGGAATATTAAGGCAACAGGCTGCA
GAAGAAACTAAATTAATTGAAGAGCAAAAAACTGTGAATAGAGTGAAAACAACAGAAAAA
TCACATAAAACTTCACAAAGAGATAGGAGTAGATCAAGAAAGCGAATTATATTTGAAGGT
CAACCAGTAGAAAACGTTCCAAATCCCGTTCAACGTCACGGCACAGAAGACGACACAGAA
GTCGGTCCAAGTCCCATCACAGAACCCGGTCGAGATCCAGACGGAGTCATTCGAGACATC
GATCCAGATCCAGAAGATCCAGATCGAGACACCGATCCTCATCACGATCCAGACATCGCT
CGTCATCAAAATCCAGACACCGGTCCCGACACTCTTCCAGACATCGGCGGAGGTCTAGGA
GTCCGTCTAGCCGATAGTGAGAAGAAGCGTCTGTTAGAGGTAGCTCGACGGAACGCCATT
AACATGTTGAAGAACGGAGCTGTACCGGCTGGAGCCGCCGCCCTCCCGCCCCATACACGG
AGTCAGGTCATGGCCGCTATACAGTCTGGAGGTAAATCGGTTGATGAACTGACAGATTTC
TGTAAGCATTTATCAAAAAAGGAAGCTCTGGGTGAACTATCATCTGTGTCATCCAATGAT
GAAGATATGTCGGAGAATGAAGACACAATAGCCTTCCATCATCCGTTCCTGGTGAAGGAA
AAAGCGCCCATCATTATGAATATAAGGGGTGGAGCTCCACTGCCCACAAAAACCAGCATC
CCTGTGGCAAACAAAGACGAACTCCGTCTACAGTTCCCTGTCTCATCGGGTACACAGCAC
AGAGAGAAAGCTGATACAACGGACAATGAAGATATGCAACTGGCGGTCATAAACACGAAA
CCATCGAGTCCATTGGCTAAAACACTGGAACCGATCGCTCTTCCCGCTCCCAAACCCGAC
TATTTAAAAGTTTTCACAGGTGGAAACAGTCTCAGCACTGTTCCTGCATTGCCAGCCGCT
ACATCAACTATAGACAAGGCTAAGGATGTTGCATCAATAGTGTCAGAGAAGTTGTCTTTA
ATAAGAAAAGAACAAGAGAATTATGAAGTTACGCCTACACATGGGTTCGGCTTCAAGAGT
TCATCCCTGGGACAATTCACGGGGTCCACTGGAGCTCACATACTTACCCCACGAGAACTA
GCCAGCGGGGCACAAGCCTGGGCTAAGAAGGATCAGCTGGTACGAGCTGCTCCCGTTGAA
GGTGGGATGGGAATGCATCTGCTACAGAAAATGGGTTGGACTCCCGGTCGGGGGTTAGGC
AAAGAGGGCACTGGGGCGTTACAACCCCTATTGCTAGAGGTGAAGCTGGACACGAGGGGT
CTAACATCTAAGGAGGAGGTGAAACCGCAGCGTATAGGTCGTCGTGGCCCGGCGCCGCTC
GTGGCTGGAGGGAAGCACCCTGTATCACTTCTCGGTGAATACTGTTCCAAACAGAAACTA
GGACCTCCTGAGTACAGTCTTTGCTTCGAATGTGGACCAGATCATAAAAAGAATTTCCTA
TTCAAGGTAAAAGTAGCGGGTATAGAATATCAGCCGGCCGTAGCCAGTGCTAACAAGAAA
CAAGCTAAGGCCGACGCTGCTCAACTAGCGTTGCAAAAACTAGGAATTGTAACATAA
Protein sequence:
MPESPIDKLKSDLRSKLDKKQESVTDNDKTKSKIQIKNLKFSTVFEETVKKAEEEAKKKK
EKLEEGEYTDSSSSSDGDEVSNSQFPKSSDLVGILRQQAAEETKLIEEQKTVNRVKTTEK
SHKTSQRDRSRSRKRIIFEGQPVENVPNPVQRHGTEDDTEVGPSPITEPGRDPDGVIRDI
DPDPEDPDRDTDPHHDPDIARHQNPDTGPDTLPDIGGGLGVRLADSEKKRLLEVARRNAI
NMLKNGAVPAGAAALPPHTRSQVMAAIQSGGKSVDELTDFCKHLSKKEALGELSSVSSND
EDMSENEDTIAFHHPFLVKEKAPIIMNIRGGAPLPTKTSIPVANKDELRLQFPVSSGTQH
REKADTTDNEDMQLAVINTKPSSPLAKTLEPIALPAPKPDYLKVFTGGNSLSTVPALPAA
TSTIDKAKDVASIVSEKLSLIRKEQENYEVTPTHGFGFKSSSLGQFTGSTGAHILTPREL
ASGAQAWAKKDQLVRAAPVEGGMGMHLLQKMGWTPGRGLGKEGTGALQPLLLEVKLDTRG
LTSKEEVKPQRIGRRGPAPLVAGGKHPVSLLGEYCSKQKLGPPEYSLCFECGPDHKKNFL
FKVKVAGIEYQPAVASANKKQAKADAAQLALQKLGIVT