| New model in OGS2.0 | DPOGS203070 |
|---|---|
| Genomic Position | scaffold47:- 100682-108521 |
| See gene structure | |
| CDS Length | 2154 |
| Paired RNAseq reads | 7608 |
| Single RNAseq reads | 24881 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007594 (0.0) |
| Best Drosophila hit | belle (0.0) |
| Best Human hit | ATP-dependent RNA helicase DDX3X isoform 3 (8e-178) |
| Best NR hit (blastp) | ATP-dependent RNA helicase belle-like [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | ATP-dependent RNA helicase belle-like [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0007286 spermatid development GO:0008026 ATP-dependent helicase activity GO:0004004 ATP-dependent RNA helicase activity GO:0005524 ATP binding GO:0003676 nucleic acid binding GO:0048477 oogenesis GO:0007283 spermatogenesis GO:0002168 instar larval development GO:0043186 P granule GO:0016442 RNA-induced silencing complex GO:0016246 RNA interference GO:0005811 lipid particle GO:0005875 microtubule associated complex GO:0043025 neuronal cell body |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR014014 RNA helicase, DEAD-box type, Q motif IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site |
| Orthology group | MCL10854 |
Nucleotide sequence:
ATGAGTAATGTTACCAACCAAAATGGAACAGGTCTAGAGCAGCAGCTTGCTGGTCTGGAC
TTGCAGCCTCAGGCTCCTAAGAGTACTGGCCGCTACATCCCTCCACATCTGCGTAGGCAG
TTGGAGGCCAAAGGTGAGGATTCTAAGCGCTCGAGCTTAGAGTCTCGACCGAGCGACACA
AGGGACAGTCGTTCATCATTCGGTGGCAACCCTAGAGGCGGCTACGACCGTGGTGGTCGG
CGCGACGACCGCGACCGTGACCGCGACCGTGACAACGATCGCGGCTACGACTCGCGATAC
CCGCGCAGGGACCGCGGTCGTGACTCGGGCTACCAGAATGGTGATTCAGAGCGATGGACG
GAGGGCGAGCGCTGGGGGGGCAGCGGGTCGGGGGGCACCACCGGCGCCAGGAGCACACTC
CCATCGAGAGACGTGCGACGCGACGAGGACTTCAACGAGCCACCGCCGCCAAGGAACGAT
CGCTGGAAGGAACCAGAGCCGAGGGAGGACCGCCAGCACTCGCGCTGGCCCTCCGATGAC
GTGCGGCGCACATCCAATCGCAGAGACGAGAACGATTGGACAATCCCGTTACCTCGCGAC
GAGCGGCAGGAGTTGGAGCTGTTTGGCACTGGCAACACAGGCATTAACTTCTCCAAATAC
GAGGATATACCGGTCGAAGCTAGCGGGGACTCCGTACCGGAATTCATTACGAGTTTCGAG
GATGTTAACCTGACGGAGATAATGCGCACGAACATTGCATTCGCACGTTACGACAAGCCG
ACTCCGGTACAGAAGTACGCTATCCCCATAGTACTAGGGCGGCGGGACGTTATGGCGTGC
GCTCAGACTGGCTCGGGAAAAACGGCGGCCTTCCTCGTGCCCATACTTAACCAGATGTAT
GAAGCGGGGCCCGTCAAGAACGCTGGTCCCTATATCAAACGTAAACAGTATCCGCTCGGT
CTAGTGCTGGCACCCACGCGCGAGCTCGCCACACAGATCTATGATGAAGCCAGGAAGTTC
GCTTATCGCTCTCGTGTGCGGCCATGTGTTGTATACGGCGGCTCTTCAATCCTGGACCAG
TTCCGCGAGTTGGAGCGCGGCTGTCACCTACTAGTGGCGACGCCCGGTCGTCTCGTGGAC
ATGCTGACTCGCGGGCGGGTCGCTTTGGACCACTGCCGCCACCTCGTGCTAGACGAGGCC
GACCGCATGTTGGACATGGGTTTCGAACCCCAAATCCGCAAGATCGTCGAGGGCCACAAC
ATGCCCAAGACCGGCGAGAGGCAGACGCTCATGTTCTCAGCTACCTTCCCCAAGCAGATA
CAGGTCCTCGCTCAGGACTTTCTCCATAACTACGTTTTCCTTGCCGTCGGCCGTGTCGGA
TCTACTTCGGAGAATATCACCCAAAAGGTGGTGTGGGTTGAAGAGCAAGACAAGCGTTCC
TTCCTGCTGGACTTACTAAATGCTTCCAACCTACTACAACGTAATAACGAAGAAGATCAG
CTCACCCTCGTCTTCGTTGAAACTAAGAAAGGAGCCGATCAATTGGAGGACTTTTTGTAC
GCGGACGGTTACCCGGTGACGTCTATCCACGGCGATCGTACTCAACGCGAGCGTGAAGAC
GCGCTGCGCCGGTTCCGTACGGGACAGACACCGATACTGGTCGCTACCGCCGTCGCCGCT
AGAGGCTTGGACATACCTCACGTGCGTCACGTAATAAACTTCGATCTGCCGTCTGATGTC
GAGGAGTACGTGCATCGTATCGGTCGTACCGGTCGTATGGGGAACCTTGGAGTGGCCACT
TCGTTCTTCAACGACTCCAACCGCGGCCTGGCGCGCGATCTGGTTGAACTGCTAGTGGAG
GCTAAGCAAGATGTGCCCAACTGGTTAACAAGTGCAGCGGTGGATGGTCGTGCTGGCGGT
GGTGGTCGTCGTGCTGGCAGCCGGTCTGGCGGCGGGCGGTTCGGTGGTAGCGGGTTCGGT
GCCCGCGATTTCCGTACCCAATCGCGGCAGGCACCACGCTCGGCCGGACCATCTACCATC
GGCTCAGGCGGTTTCGGTTACGGCGGCGGCGCGTACGGCGGCAACTACGGCGGCTCATAC
GGCGGAGGCGGCGGCGGAAACAGCAGCGGCCCTGATTGGTGGGGCGACTCTTAG
Protein sequence:
MSNVTNQNGTGLEQQLAGLDLQPQAPKSTGRYIPPHLRRQLEAKGEDSKRSSLESRPSDT
RDSRSSFGGNPRGGYDRGGRRDDRDRDRDRDNDRGYDSRYPRRDRGRDSGYQNGDSERWT
EGERWGGSGSGGTTGARSTLPSRDVRRDEDFNEPPPPRNDRWKEPEPREDRQHSRWPSDD
VRRTSNRRDENDWTIPLPRDERQELELFGTGNTGINFSKYEDIPVEASGDSVPEFITSFE
DVNLTEIMRTNIAFARYDKPTPVQKYAIPIVLGRRDVMACAQTGSGKTAAFLVPILNQMY
EAGPVKNAGPYIKRKQYPLGLVLAPTRELATQIYDEARKFAYRSRVRPCVVYGGSSILDQ
FRELERGCHLLVATPGRLVDMLTRGRVALDHCRHLVLDEADRMLDMGFEPQIRKIVEGHN
MPKTGERQTLMFSATFPKQIQVLAQDFLHNYVFLAVGRVGSTSENITQKVVWVEEQDKRS
FLLDLLNASNLLQRNNEEDQLTLVFVETKKGADQLEDFLYADGYPVTSIHGDRTQRERED
ALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVAT
SFFNDSNRGLARDLVELLVEAKQDVPNWLTSAAVDGRAGGGGRRAGSRSGGGRFGGSGFG
ARDFRTQSRQAPRSAGPSTIGSGGFGYGGGAYGGNYGGSYGGGGGGNSSGPDWWGDS